DCN1/YLR128W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Dcn1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Dcn1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dcn1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Dcn1p
Protein	Motifs in common with Dcn1p	Other motifs in this protein (but not in Dcn1p )
Ede1p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	SUPERFAMILY SSF47473: EF-hand SMART SM00027: Eps15 homology domain SMART SM00054: EF-hand, calcium binding motif SMART SM00165: Ubiquitin associated domain Pfam PF12763: efhand_3 Pfam PF00627: UBA PANTHER PTHR11216:SF10: UNCHARACTERIZED PANTHER PTHR11216: EH DOMAIN Gene3D G3DSA:1.10.238.10: no description
Shp1p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	SMART SM00553: Domain present in Saccharomyces cerevisiae S SMART SM00166: Domain present in ubiquitin-regulatory prote Pfam PF08059: SEP Pfam PF00789: UBX PANTHER PTHR23333:SF5: UBX DOMAIN CONTAINING PROTEIN PANTHER PTHR23333: UBX DOMAIN CONTAINING PROTEIN SUPERFAMILY SSF54236: Ubiquitin-like SUPERFAMILY SSF102848: NSFL1 (p97 ATPase) cofactor p47, SEP domain Gene3D G3DSA:3.10.20.90: no description
Ubp14p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z SMART SM00165: Ubiquitin associated domain Gene3D G3DSA:3.30.40.10: no description PIR superfamily PIRSF016308: Ubiquitin-specific protease (ubiquitin carboxyl-terminal hydrolase) SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006:SF175: HYPOTHETICAL PROTEIN PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH Pfam PF02148: zf-UBP Pfam PF00627: UBA
Ubc1p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067:SF29: UBIQUITIN-CONJUGATING ENZYME E2 K PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Pfam PF00179: UQ_con Pfam PF09288: UBA_3
Don1p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	SMART SM00546: Domain that may be involved in binding ubiqu Pfam PF02845: CUE
Swa2p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	PANTHER PTHR23172:SF19: AUXILIN PANTHER PTHR23172: AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED Pfam PF09145: Ubiq-assoc Gene3D G3DSA:1.25.40.10: no description Gene3D G3DSA:1.10.287.110: no description SUPERFAMILY SSF46565: Chaperone J-domain SUPERFAMILY SSF48452: TPR-like
Ubx5p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	Pfam PF13899: Thioredoxin_7 Pfam PF00789: UBX SMART SM00594: no description SMART SM00166: Domain present in ubiquitin-regulatory prote Gene3D G3DSA:3.40.30.10: no description Gene3D G3DSA:3.10.20.90: no description PANTHER PTHR23322:SF6: FAS-ASSOCIATED FACTOR-RELATED PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN SUPERFAMILY SSF54236: Ubiquitin-like
Rad23p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF00627: UBA Pfam PF00240: ubiquitin Pfam PF09280: XPC-binding SUPERFAMILY SSF54236: Ubiquitin-like SUPERFAMILY SSF101238: XPC-binding domain Gene3D G3DSA:3.10.20.90: no description Gene3D G3DSA:1.10.10.540: no description PRINTS PR01839: RAD23PROTEIN PANTHER PTHR10621:SF0: UV EXCISION REPAIR PROTEIN RAD23 PANTHER PTHR10621: UV EXCISION REPAIR PROTEIN RAD23 SMART SM00213: Ubiquitin homologues SMART SM00165: Ubiquitin associated domain SMART SM00727: Heat shock chaperonin-binding motif. TIGRFAMs TIGR00601: rad23: UV excision repair protein Rad23
Ddi1p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF09668: Asp_protease Pfam PF00627: UBA SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description PANTHER PTHR12917:SF1: DNA-DAMAGE INDUCIBLE PROTEIN DDI1 (V-SNARE-MASTER 1) PANTHER PTHR12917: ASPARTYL PROTEASE DDI-RELATED SMART SM00165: Ubiquitin associated domain
Gts1p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF01412: ArfGap Pfam PF00627: UBA SMART SM00105: Putative GTP-ase activating proteins for the SMART SM00165: Ubiquitin associated domain PANTHER PTHR23180:SF23: CENTAURIN/ARF-RELATED PANTHER PTHR23180: CENTAURIN/ARF SUPERFAMILY SSF57863: ArfGap/RecO-like zinc finger PRINTS PR00405: REVINTRACTNG
Egd2p	Gene3D G3DSA:1.10.8.10: no description	PIR superfamily PIRSF015901: Nascent polypeptide-associated complex, alpha subunit PANTHER PTHR21713:SF0: SUBFAMILY NOT NAMED PANTHER PTHR21713: NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Pfam PF01849: NAC Pfam PF00627: UBA
Cue2p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	SMART SM00546: Domain that may be involved in binding ubiqu SMART SM00463: Small MutS-related domain Pfam PF02845: CUE Pfam PF01713: Smr
Ubx2p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF00789: UBX PANTHER PTHR23322:SF14: UBX DOMAIN CONTAINING PROTEIN (FRAGMENT) PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN Gene3D G3DSA:3.10.20.90: no description SMART SM00166: Domain present in ubiquitin-regulatory prote
Vps9p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF02204: VPS9 Pfam PF02845: CUE SUPERFAMILY SSF109993: VPS9 domain SMART SM00167: Domain present in VPS9 SMART SM00546: Domain that may be involved in binding ubiqu PANTHER PTHR23101:SF25: SUBFAMILY NOT NAMED PANTHER PTHR23101: RAB GDP/GTP EXCHANGE FACTOR
Dsk2p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SMART SM00727: Heat shock chaperonin-binding motif. SMART SM00165: Ubiquitin associated domain SUPERFAMILY SSF54236: Ubiquitin-like Pfam PF00240: ubiquitin Pfam PF00627: UBA PANTHER PTHR10677: UBIQUILIN
Cue5p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF02845: CUE SMART SM00546: Domain that may be involved in binding ubiqu
Rup1p	SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description	Pfam PF00627: UBA SMART SM00165: Ubiquitin associated domain PANTHER PTHR10175: UBA DOMAIN-CONTAINING PROTEIN RUP1-RELATED
Mex67p	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like	PANTHER PTHR10662:SF22: MRNA EXPORT FACTOR MEX67 PANTHER PTHR10662: NUCLEAR RNA EXPORT FACTOR SMART SM00804: C-terminal domain of vertebrate Tap protein Gene3D G3DSA:3.80.10.10: no description Gene3D G3DSA:3.10.450.50: no description SUPERFAMILY SSF54427: NTF2-like SUPERFAMILY SSF52058: L domain-like Pfam PF03943: TAP_C

Unique domains/motifs

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This table lists domains/motifs that are unique to Dcn1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dcn1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Dcn1p
Database source	Accession number	Description
PANTHER	PTHR12281	RP42 RELATED
PANTHER	PTHR12281:SF0	SUBFAMILY NOT NAMED
Pfam	PF03556	Cullin_binding

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Dcn1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Dcn1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Dcn1p .