CCW12/YLR110C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ccw12p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ccw12p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ccw12p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ccw12p
Protein	Motifs in common with Ccw12p	Other motifs in this protein (but not in Ccw12p )
Flo9p	Pfam PF13928: Flocculin_t3	ProDom PD010352: FLO9_YEAST_P39712; SMART SM00758: no description Pfam PF00624: Flocculin Pfam PF07691: PA14
Fig2p	Pfam PF13928: Flocculin_t3	none
Ydr134cp	Pfam PF13928: Flocculin_t3	none
Flo5p	Pfam PF13928: Flocculin_t3	Gene3D G3DSA:3.90.182.10: no description Pfam PF00624: Flocculin Pfam PF07691: PA14 SMART SM00758: no description ProDom PD010352: FLO5_YEAST_P38894;

Unique domains/motifs

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This table lists domains/motifs that are unique to Ccw12p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ccw12p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Ccw12p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ccw12p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

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External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ccw12p .