RPL10/YLR075W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rpl10p domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Rpl10p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl10p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl10p
Protein	Motifs in common with Rpl10p	Other motifs in this protein (but not in Rpl10p )
Mrpl16p	SUPERFAMILY SSF54686: Ribosomal protein L16p/L10e Pfam PF00252: Ribosomal_L16 Gene3D G3DSA:3.90.1170.10: no description	PANTHER PTHR12220:SF11: 50S/60S RIBOSOMAL PROTEIN L16 PANTHER PTHR12220: 50S/60S RIBOSOMAL PROTEIN L16 TIGRFAMs TIGR01164: rplP_bact: ribosomal protein L16 PRINTS PR00060: RIBOSOMALL16

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Rpl10p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl10p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Rpl10p
Database source	Accession number	Description
PIR superfamily	PIRSF005590	Ribosomal protein L10a/L10e types
PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10
TIGRFAMs	TIGR00279	L10e: ribosomal protein L10.e

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rpl10p .

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rpl10p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rpl10p .