RPL15A/YLR029C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rpl15ap domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Rpl15ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl15ap domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl15ap
Protein	Motifs in common with Rpl15ap	Other motifs in this protein (but not in Rpl15ap )
Mrp20p	SUPERFAMILY SSF54189: Ribosomal proteins S24e, L23 and L15e	PANTHER PTHR12059:SF3: SUBFAMILY NOT NAMED PANTHER PTHR12059: RIBOSOMAL PROTEIN L23-RELATED Pfam PF00276: Ribosomal_L23
Rps24ap	SUPERFAMILY SSF54189: Ribosomal proteins S24e, L23 and L15e	ProDom PD006052: RS24_YEAST_P26782; Pfam PF01282: Ribosomal_S24e Gene3D G3DSA:3.30.70.330: no description PANTHER PTHR10496: 40S RIBOSOMAL PROTEIN S24
Rps24bp	SUPERFAMILY SSF54189: Ribosomal proteins S24e, L23 and L15e	Pfam PF01282: Ribosomal_S24e PANTHER PTHR10496: 40S RIBOSOMAL PROTEIN S24 Gene3D G3DSA:3.30.70.330: no description ProDom PD006052: RS24_YEAST_P26782;
Rpl15bp	SUPERFAMILY SSF54189: Ribosomal proteins S24e, L23 and L15e Gene3D G3DSA:3.40.1120.10: no description PANTHER PTHR11847: RIBOSOMAL PROTEIN L15 Pfam PF00827: Ribosomal_L15e	none
Rpl25p	SUPERFAMILY SSF54189: Ribosomal proteins S24e, L23 and L15e	Gene3D G3DSA:3.30.70.330: no description PANTHER PTHR11620: 60S RIBOSOMAL PROTEIN L23A Pfam PF00276: Ribosomal_L23 Pfam PF03939: Ribosomal_L23eN

Unique domains/motifs

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This table lists domains/motifs that are unique to Rpl15ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl15ap domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rpl15ap .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rpl15ap .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rpl15ap .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rpl15ap .