SNF7/YLR025W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Snf7p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Snf7p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Snf7p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Snf7p
Protein	Motifs in common with Snf7p	Other motifs in this protein (but not in Snf7p )
Vps60p	Pfam PF03357: Snf7 PANTHER PTHR22761: SNF7 - RELATED	none
Yjl049wp	PANTHER PTHR22761: SNF7 - RELATED Pfam PF03357: Snf7	none
Did4p	Pfam PF03357: Snf7	PANTHER PTHR10476:SF4: CHARGED MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING PROTEIN 2A)(CHMP2A)(VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 2-1)(VPS2-1)(HVPS2-1)(PUTATIVE BREAST ADENOCARCINOMA MARKER BC-2) PANTHER PTHR10476: CHARGED MULTIVESICULAR BODY PROTEIN
Vps24p	Pfam PF03357: Snf7	PANTHER PTHR10476:SF1: CHARGED MULTIVESICULAR BODY PROTEIN 3 PANTHER PTHR10476: CHARGED MULTIVESICULAR BODY PROTEIN
Did2p	Pfam PF03357: Snf7	PANTHER PTHR10476:SF2: CHARGED MULTIVESICULAR BODY PROTEIN 1A PANTHER PTHR10476: CHARGED MULTIVESICULAR BODY PROTEIN
Vps20p	Pfam PF03357: Snf7 PANTHER PTHR22761: SNF7 - RELATED	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Snf7p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Snf7p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Snf7p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Snf7p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Snf7p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Snf7p .