This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Cof1p domain/motif information see the external links section.

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This table lists proteins that share domains/motifs in common with those found in Cof1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cof1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Cof1p
Protein	Motifs in common with Cof1p	Other motifs in this protein (but not in Cof1p )
Abp1p	Gene3D G3DSA:3.40.20.10: no description SUPERFAMILY SSF55753: Actin depolymerizing proteins SMART SM00102: Actin depolymerisation factor/cofilin -like Pfam PF00241: Cofilin_ADF	PRINTS PR00452: SH3DOMAIN PRINTS PR00499: P67PHOX Gene3D G3DSA:2.30.30.40: no description SUPERFAMILY SSF50044: SH3-domain SMART SM00326: Src homology PANTHER PTHR10829:SF2: DREBRIN-RELATED PANTHER PTHR10829: CORTACTIN AND DREBRIN Pfam PF00018: SH3_1
Aim7p	SMART SM00102: Actin depolymerisation factor/cofilin -like Gene3D G3DSA:3.40.20.10: no description Pfam PF00241: Cofilin_ADF SUPERFAMILY SSF55753: Actin depolymerizing proteins	PIR superfamily PIRSF001788: Glia maturation factor beta PANTHER PTHR11249:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11249: GLIAL FACTOR NATURATION FACTOR
Twf1p	Pfam PF00241: Cofilin_ADF Gene3D G3DSA:3.40.20.10: no description SMART SM00102: Actin depolymerisation factor/cofilin -like SUPERFAMILY SSF55753: Actin depolymerizing proteins	PANTHER PTHR13759:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13759: TWINFILIN
Yhr035wp	Gene3D G3DSA:3.40.20.10: no description	SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 Pfam PF04811: Sec23_trunk PANTHER PTHR11141: PROTEIN TRANSPORT PROTEIN SEC23 Gene3D G3DSA:3.40.50.410: no description
Sfb3p	Gene3D G3DSA:3.40.20.10: no description	SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 Gene3D G3DSA:2.60.40.1670: no description Gene3D G3DSA:3.40.50.410: no description PANTHER PTHR13803:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13803: SEC24-RELATED PROTEIN Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF08033: Sec23_BS Pfam PF04810: zf-Sec23_Sec24 Pfam PF00626: Gelsolin
Sec24p	Gene3D G3DSA:3.40.20.10: no description	PANTHER PTHR13803:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13803: SEC24-RELATED PROTEIN Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF04810: zf-Sec23_Sec24 Pfam PF08033: Sec23_BS Pfam PF00626: Gelsolin SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24 Gene3D G3DSA:3.40.50.410: no description
Sfb2p	Gene3D G3DSA:3.40.20.10: no description	Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF08033: Sec23_BS Pfam PF04810: zf-Sec23_Sec24 Pfam PF00626: Gelsolin Gene3D G3DSA:2.60.40.1670: no description Gene3D G3DSA:3.40.50.410: no description PANTHER PTHR13803:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13803: SEC24-RELATED PROTEIN SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24
Sec23p	Gene3D G3DSA:3.40.20.10: no description	Gene3D G3DSA:2.60.40.1670: no description Gene3D G3DSA:3.40.50.410: no description PANTHER PTHR11141: PROTEIN TRANSPORT PROTEIN SEC23 SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24 Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF08033: Sec23_BS Pfam PF04810: zf-Sec23_Sec24 Pfam PF00626: Gelsolin

This table lists domains/motifs that are unique to Cof1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cof1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Cof1p
Database source	Accession number	Description
PANTHER	PTHR11913	COFILIN-RELATED

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

The following external links can be used to directly search external databases for domain/motif information for Cof1p .