CYC1/YJR048W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Cyc1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Cyc1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cyc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Cyc1p
Protein	Motifs in common with Cyc1p	Other motifs in this protein (but not in Cyc1p )
Cyc7p	Pfam PF00034: Cytochrom_C PANTHER PTHR11961:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11961: CYTOCHROME C SUPERFAMILY SSF46626: Cytochrome c Gene3D G3DSA:1.10.760.10: no description PRINTS PR00604: CYTCHRMECIAB	none
Cyt1p	Gene3D G3DSA:1.10.760.10: no description SUPERFAMILY SSF46626: Cytochrome c	PRINTS PR00603: CYTOCHROMEC1 PANTHER PTHR10266:SF2: CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL PANTHER PTHR10266: CYTOCHROME C1 Gene3D G3DSA:1.20.5.100: no description SUPERFAMILY SSF81496: Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Pfam PF02167: Cytochrom_C1

Unique domains/motifs

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This table lists domains/motifs that are unique to Cyc1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cyc1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Cyc1p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Cyc1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Cyc1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Cyc1p .