PAU1/YJL223C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Pau1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Pau1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pau1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Pau1p
Protein	Motifs in common with Pau1p	Other motifs in this protein (but not in Pau1p )
Pau8p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau7p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau9p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Tip1p	Pfam PF00660: SRP1_TIP1	none
Pau24p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau3p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau10p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau2p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Tir1p	Pfam PF00660: SRP1_TIP1	Pfam PF00399: PIR
Pau5p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau11p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau12p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau13p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Tir3p	Pfam PF00660: SRP1_TIP1	none
Pau14p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau15p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Dan1p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Dan4p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau16p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau17p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau18p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none
Pau23p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Ylr040cp	Pfam PF00660: SRP1_TIP1	none
Pau4p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau19p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau6p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau20p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Tir4p	Pfam PF00660: SRP1_TIP1	none
Tir2p	Pfam PF00660: SRP1_TIP1	Pfam PF00399: PIR
Pau21p	Pfam PF00660: SRP1_TIP1 PANTHER PTHR31002: SERIPAUPERIN	none
Pau22p	PANTHER PTHR31002: SERIPAUPERIN Pfam PF00660: SRP1_TIP1	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Pau1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pau1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Pau1p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Pau1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	1 - 20

External Links

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The following external links can be used to directly search external databases for domain/motif information for Pau1p .