GCD14/YJL125C Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Gcd14p domain/motif information see the external links section.


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Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Gcd14p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Gcd14p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Gcd14p
Protein Motifs in common with Gcd14p Other motifs in this protein (but not in Gcd14p )
Ncl1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF01189: Nol1_Nop2_Fmu
PANTHER PTHR22808:SF1: PUTATIVE METHYLTRANSFERASE NCL1(YEAST)-RELATED
PANTHER PTHR22808: NCL1(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING
PRINTS PR02008: RCMTFAMILY
PRINTS PR02011: RCMTNCL1
Hmt1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR11006:SF19: PROTEIN ARGININE N-METHYLTRANSFERASE 1, 4
PANTHER PTHR11006: PROTEIN ARGININE N-METHYLTRANSFERASE
Gene3D G3DSA:2.70.160.11: no description
Pfam PF13847: Methyltransf_31
Trm7p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR10920: RIBOSOMAL RNA METHYLTRANSFERASE
Pfam PF01728: FtsJ
Hsl7p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF05185: PRMT5
Gene3D G3DSA:2.70.160.11: no description
PANTHER PTHR10738: PROTEIN ARGININE N-METHYLTRANSFERASE 5
PIR superfamily PIRSF015894: Arginine N-methyltransferase, PRMT5 type
Bmt2p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF11968: DUF3321
Ybr225wp Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
none
Abd1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR12189: MRNA (GUANINE-7-)METHYLTRANSFERASE
Pfam PF03291: Pox_MCEL
PIR superfamily PIRSF028762: mRNA (guanine-N(7))-methyltransferase
Tae1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF05891: Methyltransf_PK
PANTHER PTHR12753:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12753: AD-003 - RELATED
PIR superfamily PIRSF016958: Predicted S-adenosyl-L-methionine dependent methyltransferase, AD-003 type
Efm2p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF10294: Methyltransf_16
PANTHER PTHR14614:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR14614: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Spb1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR10920:SF13: RRNA METHYLTRANSFERASE 3
PANTHER PTHR10920: RIBOSOMAL RNA METHYLTRANSFERASE
Pfam PF07780: Spb1_C
Pfam PF11861: DUF3381
Pfam PF01728: FtsJ
Bud23p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR12734:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12734: METHYLTRANSFERASE-RELATED
Pfam PF12589: WBS_methylT
Pfam PF08241: Methyltransf_11
Nop1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR10335: RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN
Gene3D G3DSA:3.30.200.20: no description
PIR superfamily PIRSF006540: Fibrillarin
Pfam PF01269: Fibrillarin
PRINTS PR00052: FIBRILLARIN
Trm8p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
TIGRFAMs TIGR00091: TIGR00091: tRNA (guanine-N(7)-)-methyltransferase
Pfam PF02390: Methyltransf_4
PANTHER PTHR23417:SF1: TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
PANTHER PTHR23417: 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
Rrp8p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF05148: Methyltransf_8
PANTHER PTHR12787:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12787: UNCHARACTERIZED
Trm1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
TIGRFAMs TIGR00308: TRM1: N2,N2-dimethylguanosine tRNA methyltransfera
Pfam PF02005: TRM
PANTHER PTHR10631:SF0: N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE
PANTHER PTHR10631: N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE
Mtq2p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF13659: Methyltransf_26
PANTHER PTHR18895:SF8: N6-DNA-METHYLTRANSFERASE
PANTHER PTHR18895: METHYLTRANSFERASE
TIGRFAMs TIGR00537: hemK_rel_arch: putative methylase
Oms1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF13489: Methyltransf_23
PANTHER PTHR10108:SF43: PUTATIVE UNCHARACTERIZED PROTEIN
PANTHER PTHR10108: METHYLTRANSFERASE
Ppm1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PIR superfamily PIRSF016305: Leucine carboxyl methyltransferase, LCMT1 type
Pfam PF04072: LCM
PANTHER PTHR13600:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR13600: LEUCINE CARBOXYL METHYLTRANSFERASE
Dot1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR21451: HISTONE H3 METHYLTRANSFERASE
Pfam PF08123: DOT1
Rmt2p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PIR superfamily PIRSF038148: Arginine N-methyltransferase 2
PANTHER PTHR32379:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR32379: FAMILY NOT NAMED
Tmt1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF13847: Methyltransf_31
PANTHER PTHR10108:SF168: PUTATIVE UNCHARACTERIZED PROTEIN
PANTHER PTHR10108: METHYLTRANSFERASE
Mrm2p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF01728: FtsJ
PIR superfamily PIRSF005461: 23S ribosomal RNA methyltransferase
PANTHER PTHR10920:SF11: RIBOSOMAL RNA METHYLTRANSFERASE 2
PANTHER PTHR10920: RIBOSOMAL RNA METHYLTRANSFERASE
Ime4p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR12829:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12829: N6-ADENOSINE-METHYLTRANSFERASE
Pfam PF05063: MT-A70
Trm5p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR23245:SF25: METHIONINE 10+ HOMOLOG
PANTHER PTHR23245: UNCHARACTERIZED
Gene3D G3DSA:3.30.300.110: no description
Pfam PF02475: Met_10
Crg1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF08241: Methyltransf_11
PANTHER PTHR10108:SF167: PUTATIVE UNCHARACTERIZED PROTEIN
PANTHER PTHR10108: METHYLTRANSFERASE
See1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF13847: Methyltransf_31
PANTHER PTHR12843:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12843: UNCHARACTERIZED
Hpm1p Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR21095: UNCHARACTERIZED
Yjr129cp SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR23109: UNCHARACTERIZED
Pfam PF10294: Methyltransf_16
Rsm22p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR13184: 37S RIBOSOMAL PROTEIN S22, MITOCHONDRIAL
Pfam PF09243: Rsm22
PIR superfamily PIRSF007797: Mitochondrial ribosomal protein, fungal Rsm22 type
Trm2p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF05958: tRNA_U5-meth_tr
Pfam PF01938: TRAM
Gene3D G3DSA:2.40.50.140: no description
SUPERFAMILY SSF50249: Nucleic acid-binding proteins
PANTHER PTHR11061:SF21: TRNA (URACIL-5-)-METHYLTRANSFERASE
PANTHER PTHR11061: RNA M5U METHYLTRANSFERASE FAMILY
Rkm5p Gene3D G3DSA:3.40.50.150: no description
none
Spe4p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF01564: Spermine_synth
Gene3D G3DSA:2.30.140.10: no description
PANTHER PTHR11558:SF11: SPERMIDINE SYNTHASE
PANTHER PTHR11558: SPERMIDINE/SPERMINE SYNTHASE
TIGRFAMs TIGR00417: speE: spermidine synthase
Nnt1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR14614:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR14614: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Pfam PF10294: Methyltransf_16
Trm12p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF02475: Met_10
PANTHER PTHR23245: UNCHARACTERIZED
Erg6p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF08498: Sterol_MT_C
Pfam PF08241: Methyltransf_11
PANTHER PTHR10108:SF21: S-ADENOSYL-L-METHIONINE:DELTA24-STEROL-C-METHYLTRANSFERASE
PANTHER PTHR10108: METHYLTRANSFERASE
Trm9p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR13069: UNCHARACTERIZED
Pfam PF08241: Methyltransf_11
Coq5p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR10108:SF24: UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERASE
PANTHER PTHR10108: METHYLTRANSFERASE
Pfam PF01209: Ubie_methyltran
TIGRFAMs TIGR01934: MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesi
Mtf1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PIR superfamily PIRSF011649: Mitochondrial transcription factor mtTFB
Gene3D G3DSA:1.10.8.100: no description
Pfam PF00398: RrnaAD
Rcm1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PRINTS PR02008: RCMTFAMILY
Pfam PF01189: Nol1_Nop2_Fmu
PANTHER PTHR22807:SF4: WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN 20
PANTHER PTHR22807: NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING
Ynl024cp Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF10294: Methyltransf_16
PANTHER PTHR14614:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR14614: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Nop2p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PRINTS PR02008: RCMTFAMILY
PRINTS PR02012: RCMTNOP2
PANTHER PTHR22807:SF11: NUCLEOLAR PROTEIN NOL1/NOP2(YEAST)
PANTHER PTHR22807: NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING
Pfam PF01189: Nol1_Nop2_Fmu
TIGRFAMs TIGR00446: nop2p: NOL1/NOP2/sun family putative RNA methylase
Mtq1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
TIGRFAMs TIGR00536: hemK_fam: methyltransferase, HemK family
Pfam PF05175: MTS
PANTHER PTHR18895:SF7: HEMK METHYLTRANSFERASE FAMILY MEMBER
PANTHER PTHR18895: METHYLTRANSFERASE
Ynl092wp Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR12303: UNCHARACTERIZED
Pfam PF07942: N2227
Coq3p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR23134:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR23134: HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE
TIGRFAMs TIGR01983: UbiG: 3-demethylubiquinone-9 3-O-methyltransferase
Pfam PF13489: Methyltransf_23
Trm11p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PRINTS PR00507: N12N6MTFRASE
PANTHER PTHR13370:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR13370: RNA METHYLASE-RELATED
Pfam PF01170: UPF0020
PIR superfamily PIRSF017259: tRNA guanosine-2'-O-methyltransferase, TRM11 type
Ppm2p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF04072: LCM
Pfam PF13418: Kelch_4
Gene3D G3DSA:2.120.10.80: no description
PANTHER PTHR13600:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR13600: LEUCINE CARBOXYL METHYLTRANSFERASE
SMART SM00612: no description
SUPERFAMILY SSF50965: Galactose oxidase, central domain
Abp140p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
Pfam PF08242: Methyltransf_12
PANTHER PTHR22809:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR22809: METHYLTRANSFERASE-RELATED
Tgs1p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR14741:SF6: P2573 PROTEIN
PANTHER PTHR14741: S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED
Pfam PF09445: Methyltransf_15
Dim1p Gene3D G3DSA:3.40.50.150: no description
SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
PANTHER PTHR11727:SF7: SUBFAMILY NOT NAMED
PANTHER PTHR11727: DIMETHYLADENOSINE TRANSFERASE
SMART SM00650: Ribosomal RNA adenine dimethylases
TIGRFAMs TIGR00755: ksgA: dimethyladenosine transferase
Pfam PF00398: RrnaAD
Spe3p SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150: no description
PANTHER PTHR11558:SF11: SPERMIDINE SYNTHASE
PANTHER PTHR11558: SPERMIDINE/SPERMINE SYNTHASE
Pfam PF01564: Spermine_synth
TIGRFAMs TIGR00417: speE: spermidine synthase
Gene3D G3DSA:2.30.140.10: no description

Unique domains/motifs


This table lists domains/motifs that are unique to Gcd14p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Gcd14p domain/motif information see the external links section.

Last updated on 2013-12-16

Domain/motifs that are unique to Gcd14p
Database source Accession number Description
Gene3D G3DSA:3.10.330.20 no description
PIR superfamily PIRSF017269 tRNA methyltransferase, GCD14 type
PANTHER PTHR12133 UNCHARACTERIZED METHYLTRANSFERASE
PANTHER PTHR12133:SF0 SUBFAMILY NOT NAMED
Pfam PF08704 GCD14

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Gcd14p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Gcd14p .


The following external links can be used to directly search external databases for domain/motif information for Gcd14p .