RPE1/YJL121C Domains/Motifs and Signal Peptides 
To directly search external databases for Rpe1p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Rpe1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rpe1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Rpe1p | ||
|---|---|---|
| Protein | Motifs in common with Rpe1p | Other motifs in this protein (but not in Rpe1p ) |
| Imd1p | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF00478: IMPDH Pfam PF00571: CBS SMART SM00116: Domain in cystathionine beta-synthase and ot SUPERFAMILY SSF51412: Inosine monophosphate dehydrogenase (IMPDH) SUPERFAMILY SSF54631: CBS-domain PANTHER PTHR11911:SF6: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE PANTHER PTHR11911: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| Yar075wp | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF00478: IMPDH PANTHER PTHR11911:SF6: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE PANTHER PTHR11911: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED SUPERFAMILY SSF51412: Inosine monophosphate dehydrogenase (IMPDH) |
| Pyc2p | Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF89000: post-HMGL domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif SUPERFAMILY SSF51230: Single hybrid motif Pfam PF02786: CPSase_L_D2 Pfam PF02436: PYC_OADA Pfam PF00289: CPSase_L_chain Pfam PF02785: Biotin_carb_C Pfam PF00682: HMGL-like Pfam PF00364: Biotin_lipoyl Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:1.10.10.60: no description Gene3D G3DSA:3.10.600.10: no description Gene3D G3DSA:2.40.50.100: no description PIR superfamily PIRSF001594: Pyruvate carboxylase PANTHER PTHR18866:SF10: PYRUVATE CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SMART SM00878: Biotin carboxylase C-terminal domain TIGRFAMs TIGR01235: pyruv_carbox: pyruvate carboxylase |
| His7p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like TIGRFAMs TIGR00735: hisF: imidazoleglycerol phosphate synthase, cyclas TIGRFAMs TIGR01855: IMP_synth_hisH: imidazole glycerol phosphate synth Pfam PF00977: His_biosynth Pfam PF00117: GATase PANTHER PTHR21235:SF2: IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF (IGP SYNTHASE SUBUNIT HISF) PANTHER PTHR21235: IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H (IGP SYNTHASE SUBUNIT HISF/H) Gene3D G3DSA:3.40.50.880: no description PIR superfamily PIRSF036936: Imidazole glycerol phosphate synthase HisHF |
| Aro4p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR00034: aroFGH: 3-deoxy-7-phosphoheptulonate synthase Pfam PF00793: DAHP_synth_1 SUPERFAMILY SSF51569: Aldolase PANTHER PTHR21225: PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE (DAHP SYNTHETASE) PIR superfamily PIRSF001361: 3-deoxy-7-phosphoheptulonate synthase |
| Lys21p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR10277:SF21: HOMOCITRATE SYNTHASE PANTHER PTHR10277: HOMOCITRATE SYNTHASE-RELATED TIGRFAMs TIGR02146: LysS_fung_arch: homocitrate synthase Pfam PF00682: HMGL-like SUPERFAMILY SSF51569: Aldolase |
| Glt1p | Gene3D G3DSA:3.20.20.70: no description |
Gene3D G3DSA:3.60.20.10: no description Gene3D G3DSA:2.160.20.60: no description Gene3D G3DSA:1.10.1060.10: no description Gene3D G3DSA:3.40.50.720: no description Gene3D G3DSA:3.50.50.60: no description TIGRFAMs TIGR01317: GOGAT_sm_gam: glutamate synthase, NADH/NADPH, smal PRINTS PR00419: ADXRDTASE Pfam PF01645: Glu_synthase Pfam PF00310: GATase_2 Pfam PF04898: Glu_syn_central Pfam PF01493: GXGXG Pfam PF07992: Pyr_redox_2 SUPERFAMILY SSF51395: FMN-linked oxidoreductases SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases) SUPERFAMILY SSF69336: Alpha subunit of glutamate synthase, C-terminal domain SUPERFAMILY SSF51971: Nucleotide-binding domain SUPERFAMILY SSF46548: alpha-helical ferredoxin PIR superfamily PIRSF000187: Glutamate synthase (NADH/NADPH), eukaryotic type PANTHER PTHR11938:SF1: GLUTAMATE SYNTHASE PANTHER PTHR11938: FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| Lys20p | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF00682: HMGL-like PANTHER PTHR10277:SF21: HOMOCITRATE SYNTHASE PANTHER PTHR10277: HOMOCITRATE SYNTHASE-RELATED SUPERFAMILY SSF51569: Aldolase TIGRFAMs TIGR02146: LysS_fung_arch: homocitrate synthase |
| Trp1p | Gene3D G3DSA:3.20.20.70: no description SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel |
Pfam PF00697: PRAI PANTHER PTHR22854:SF6: N-(5-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE PANTHER PTHR22854: TRYPTOPHAN BIOSYNTHESIS PROTEIN |
| Aro3p | Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF51569: Aldolase PANTHER PTHR21225: PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE (DAHP SYNTHETASE) TIGRFAMs TIGR00034: aroFGH: 3-deoxy-7-phosphoheptulonate synthase Pfam PF00793: DAHP_synth_1 PIR superfamily PIRSF001361: 3-deoxy-7-phosphoheptulonate synthase |
| Tpi1p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR00419: tim: triose-phosphate isomerase Pfam PF00121: TIM SUPERFAMILY SSF51351: Triosephosphate isomerase (TIM) PANTHER PTHR21139: TRIOSEPHOSPHATE ISOMERASE |
| Aro1p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR01809: Shik-DH-AROM: shikimate-5-dehydrogenase TIGRFAMs TIGR01357: aroB: 3-dehydroquinate synthase TIGRFAMs TIGR01356: aroA: 3-phosphoshikimate 1-carboxyvinyltransferase TIGRFAMs TIGR01093: aroD: 3-dehydroquinate dehydratase, type I Gene3D G3DSA:3.40.50.1970: no description Gene3D G3DSA:1.20.1090.10: no description Gene3D G3DSA:3.65.10.10: no description Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.40.192.10: no description Gene3D G3DSA:3.40.50.720: no description PRINTS PR01100: SHIKIMTKNASE SUPERFAMILY SSF55205: EPT/RTPC-like SUPERFAMILY SSF56796: Dehydroquinate synthase-like SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF53223: Aminoacid dehydrogenase-like, N-terminal domain SUPERFAMILY SSF51735: NAD(P)-binding Rossmann-fold domains SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases Pfam PF00275: EPSP_synthase Pfam PF01761: DHQ_synthase Pfam PF01487: DHquinase_I Pfam PF01202: SKI Pfam PF08501: Shikimate_dh_N Pfam PF01488: Shikimate_DH PIR superfamily PIRSF000514: Pentafunctional AroM protein PANTHER PTHR21090:SF1: 3-DEHYDROQUINATE SYNTHASE PANTHER PTHR21090: AROM/DEHYDROQUINATE SYNTHASE |
| Ura3p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR32557:SF0: OROTIDINE 5-PHOSPHATE DECARBOXYLASE PANTHER PTHR32557: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE SMART SM00934: Orotidine 5'-phosphate decarboxylase / HUMP TIGRFAMs TIGR01740: pyrF: orotidine 5'-phosphate decarboxylase Pfam PF00215: OMPdecase |
| Snz3p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR31829:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31829: FAMILY NOT NAMED PIR superfamily PIRSF029271: Pyridoxine biosynthesis protein Pdx1 TIGRFAMs TIGR00343: TIGR00343: pyridoxal 5'-phosphate synthase, syntha Pfam PF01680: SOR_SNZ |
| Bna6p | Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF51690: Nicotinate/Quinolinate PRTase C-terminal domain-like SUPERFAMILY SSF54675: Nicotinate/Quinolinate PRTase N-terminal domain-like TIGRFAMs TIGR00078: nadC: nicotinate-nucleotide diphosphorylase (carbo Gene3D G3DSA:3.90.1170.20: no description Pfam PF01729: QRPTase_C Pfam PF02749: QRPTase_N PANTHER PTHR32179: FAMILY NOT NAMED |
| Trp5p | Gene3D G3DSA:3.20.20.70: no description SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel |
Pfam PF00290: Trp_syntA Pfam PF00291: PALP PANTHER PTHR10314:SF3: TRYPTOPHAN SYNTHASE BETA CHAIN PANTHER PTHR10314: SER/THR DEHYDRATASE, TRP SYNTHASE Gene3D G3DSA:3.40.50.1100: no description TIGRFAMs TIGR00263: trpB: tryptophan synthase, beta subunit TIGRFAMs TIGR00262: trpA: tryptophan synthase, alpha subunit SUPERFAMILY SSF53686: Tryptophan synthase beta subunit-like PLP-dependent enzymes |
| Hem2p | Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF51569: Aldolase PANTHER PTHR11458:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11458: PORPHOBILINOGEN SYNTHASE PRINTS PR00144: DALDHYDRTASE SMART SM01004: Delta-aminolevulinic acid dehydratase PIR superfamily PIRSF001415: Porphobilinogen synthase Pfam PF00490: ALAD |
| Pyc1p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR18866:SF10: PYRUVATE CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SMART SM00878: Biotin carboxylase C-terminal domain Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:1.10.10.60: no description Gene3D G3DSA:3.10.600.10: no description Gene3D G3DSA:2.40.50.100: no description PIR superfamily PIRSF001594: Pyruvate carboxylase TIGRFAMs TIGR01235: pyruv_carbox: pyruvate carboxylase Pfam PF02786: CPSase_L_D2 Pfam PF02436: PYC_OADA Pfam PF00289: CPSase_L_chain Pfam PF02785: Biotin_carb_C Pfam PF00682: HMGL-like Pfam PF00364: Biotin_lipoyl SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF89000: post-HMGL domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif SUPERFAMILY SSF51230: Single hybrid motif |
| Snf4p | Gene3D G3DSA:3.20.20.70: no description |
SMART SM00116: Domain in cystathionine beta-synthase and ot SUPERFAMILY SSF54631: CBS-domain Pfam PF00571: CBS PANTHER PTHR13780:SF13: SUBFAMILY NOT NAMED PANTHER PTHR13780: AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT Gene3D G3DSA:3.10.580.10: no description |
| Nqm1p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR10683: TRANSALDOLASE TIGRFAMs TIGR00874: talAB: transaldolase SUPERFAMILY SSF51569: Aldolase Pfam PF00923: Transaldolase |
| Bio2p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR00433: bioB: biotin synthase Pfam PF06968: BATS Pfam PF04055: Radical_SAM PANTHER PTHR22976:SF1: BIOTIN SYNTHASE PANTHER PTHR22976: BIOTIN SYNTHASE SMART SM00729: Elongator protein 3, MiaB family, Radical SA SMART SM00876: Biotin and Thiamin Synthesis associated doma SUPERFAMILY SSF102114: Radical SAM enzymes |
| Oye2p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR22893:SF10: NADPH DEHYDROGENASE (OLD YELLOW ENZYME) PANTHER PTHR22893: NADH OXIDOREDUCTASE-RELATED Pfam PF00724: Oxidored_FMN SUPERFAMILY SSF51395: FMN-linked oxidoreductases |
| Imd2p | Gene3D G3DSA:3.20.20.70: no description |
PIR superfamily PIRSF000130: Inosine-5'-monophosphate dehydrogenase Pfam PF00478: IMPDH Pfam PF00571: CBS PANTHER PTHR11911:SF6: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE PANTHER PTHR11911: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED SUPERFAMILY SSF51412: Inosine monophosphate dehydrogenase (IMPDH) SUPERFAMILY SSF54631: CBS-domain SMART SM00116: Domain in cystathionine beta-synthase and ot TIGRFAMs TIGR01302: IMP_dehydrog: inosine-5'-monophosphate dehydrogena |
| His6p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR02129: hisA_euk: phosphoribosylformimino-5-aminoimidazole Pfam PF00977: His_biosynth PANTHER PTHR21169:SF0: SUBFAMILY NOT NAMED PANTHER PTHR21169: 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE |
| Yjr149wp | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF03060: NMO SUPERFAMILY SSF51412: Inosine monophosphate dehydrogenase (IMPDH) PANTHER PTHR32332:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32332: FAMILY NOT NAMED |
| Fba1p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR30559:SF0: FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS 2 PANTHER PTHR30559: FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS 2 TIGRFAMs TIGR01520: FruBisAldo_II_A: fructose-bisphosphate aldolase, c TIGRFAMs TIGR00167: cbbA: ketose-bisphosphate aldolase Pfam PF01116: F_bP_aldolase SUPERFAMILY SSF51569: Aldolase PIR superfamily PIRSF001359: Fructose-bisphosphate aldolase II |
| Trp3p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
PRINTS PR00097: ANTSNTHASEII PRINTS PR00096: GATASE PRINTS PR00099: CPSGATASE SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like TIGRFAMs TIGR00566: trpG_papA: glutamine amidotransferase of anthranil Gene3D G3DSA:3.40.50.880: no description Pfam PF00218: IGPS Pfam PF00117: GATase PANTHER PTHR11922:SF3: ANTHRANILATE SYNTHASE COMPONENT II PANTHER PTHR11922: GMP SYNTHASE-RELATED |
| Ura1p | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF01180: DHO_dh PANTHER PTHR11938:SF11: SUBFAMILY NOT NAMED PANTHER PTHR11938: FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE SUPERFAMILY SSF51395: FMN-linked oxidoreductases TIGRFAMs TIGR01037: pyrD_sub1_fam: dihydroorotate dehydrogenase family PIR superfamily PIRSF000164: Dihydroorotate oxidase |
| Tal1p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR10683: TRANSALDOLASE Pfam PF00923: Transaldolase SUPERFAMILY SSF51569: Aldolase TIGRFAMs TIGR00874: talAB: transaldolase |
| Dus3p | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF01207: Dus SUPERFAMILY SSF51395: FMN-linked oxidoreductases PANTHER PTHR11082:SF8: TRNA-DIHYDROURIDINE SYNTHASE 3 PANTHER PTHR11082: TRNA-DIHYDROURIDINE SYNTHASE |
| Dus4p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR11082:SF6: TRNA-DIHYDROURIDINE SYNTHASE 4 PANTHER PTHR11082: TRNA-DIHYDROURIDINE SYNTHASE Pfam PF01207: Dus SUPERFAMILY SSF51395: FMN-linked oxidoreductases PIR superfamily PIRSF006621: tRNA-dihydrouridine synthase |
| Imd3p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR01302: IMP_dehydrog: inosine-5'-monophosphate dehydrogena PIR superfamily PIRSF000130: Inosine-5'-monophosphate dehydrogenase Pfam PF00478: IMPDH Pfam PF00571: CBS PANTHER PTHR11911:SF6: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE PANTHER PTHR11911: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED SMART SM00116: Domain in cystathionine beta-synthase and ot SUPERFAMILY SSF51412: Inosine monophosphate dehydrogenase (IMPDH) SUPERFAMILY SSF54631: CBS-domain |
| Cyb2p | Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF51395: FMN-linked oxidoreductases SUPERFAMILY SSF55856: Cytochrome b5-like heme/steroid binding domain Pfam PF01070: FMN_dh Pfam PF00173: Cyt-b5 Gene3D G3DSA:3.10.120.10: no description PRINTS PR00363: CYTOCHROMEB5 PANTHER PTHR10578:SF10: CYTOCHROME B2 PANTHER PTHR10578: (S)-2-HYDROXY-ACID OXIDASE-RELATED |
| Imd4p | Gene3D G3DSA:3.20.20.70: no description |
PIR superfamily PIRSF000130: Inosine-5'-monophosphate dehydrogenase SUPERFAMILY SSF51412: Inosine monophosphate dehydrogenase (IMPDH) SUPERFAMILY SSF54631: CBS-domain SMART SM00116: Domain in cystathionine beta-synthase and ot TIGRFAMs TIGR01302: IMP_dehydrog: inosine-5'-monophosphate dehydrogena Pfam PF00478: IMPDH Pfam PF00571: CBS PANTHER PTHR11911:SF6: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE PANTHER PTHR11911: INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| Dus1p | Gene3D G3DSA:3.20.20.70: no description |
SUPERFAMILY SSF51395: FMN-linked oxidoreductases PANTHER PTHR11082:SF5: TRNA-DIHYDROURIDINE SYNTHASE 1 PANTHER PTHR11082: TRNA-DIHYDROURIDINE SYNTHASE Pfam PF01207: Dus |
| Snz1p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
Pfam PF01680: SOR_SNZ TIGRFAMs TIGR00343: TIGR00343: pyridoxal 5'-phosphate synthase, syntha PANTHER PTHR31829:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31829: FAMILY NOT NAMED PIR superfamily PIRSF029271: Pyridoxine biosynthesis protein Pdx1 |
| Leu4p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR00970: leuA_yeast: 2-isopropylmalate synthase SMART SM00917: LeuA allosteric (dimerisation) domain SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF110921: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain SUPERFAMILY SSF89000: post-HMGL domain-like Pfam PF00682: HMGL-like Pfam PF08502: LeuA_dimer PANTHER PTHR10277:SF9: 2-ISOPROPYLMALATE SYNTHASE PANTHER PTHR10277: HOMOCITRATE SYNTHASE-RELATED |
| Snz2p | SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel Gene3D G3DSA:3.20.20.70: no description |
Pfam PF01680: SOR_SNZ PANTHER PTHR31829:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31829: FAMILY NOT NAMED TIGRFAMs TIGR00343: TIGR00343: pyridoxal 5'-phosphate synthase, syntha PIR superfamily PIRSF029271: Pyridoxine biosynthesis protein Pdx1 |
| Smm1p | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF01207: Dus SUPERFAMILY SSF51395: FMN-linked oxidoreductases PIR superfamily PIRSF006621: tRNA-dihydrouridine synthase PANTHER PTHR11082:SF4: TRNA-DIHYDROURIDINE SYNTHASE 2 PANTHER PTHR11082: TRNA-DIHYDROURIDINE SYNTHASE |
| Leu9p | Gene3D G3DSA:3.20.20.70: no description |
SMART SM00917: LeuA allosteric (dimerisation) domain SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF110921: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain SUPERFAMILY SSF89000: post-HMGL domain-like PANTHER PTHR10277:SF9: 2-ISOPROPYLMALATE SYNTHASE PANTHER PTHR10277: HOMOCITRATE SYNTHASE-RELATED TIGRFAMs TIGR00970: leuA_yeast: 2-isopropylmalate synthase Pfam PF00682: HMGL-like Pfam PF08502: LeuA_dimer |
| Lip5p | Gene3D G3DSA:3.20.20.70: no description |
TIGRFAMs TIGR00510: lipA: lipoyl synthase PIR superfamily PIRSF005963: Lipoyl synthase SMART SM00729: Elongator protein 3, MiaB family, Radical SA PANTHER PTHR10949:SF0: LIPOYL SYNTHASE PANTHER PTHR10949: LIPOYL SYNTHASE SUPERFAMILY SSF102114: Radical SAM enzymes Pfam PF04055: Radical_SAM |
| Oye3p | Gene3D G3DSA:3.20.20.70: no description |
PANTHER PTHR22893:SF10: NADPH DEHYDROGENASE (OLD YELLOW ENZYME) PANTHER PTHR22893: NADH OXIDOREDUCTASE-RELATED Pfam PF00724: Oxidored_FMN SUPERFAMILY SSF51395: FMN-linked oxidoreductases |
| Tyw1p | Gene3D G3DSA:3.20.20.70: no description |
Pfam PF04055: Radical_SAM Pfam PF08608: Wyosine_form Pfam PF00258: Flavodoxin_1 PANTHER PTHR13930: RSAFD1-RELATED Gene3D G3DSA:3.40.50.360: no description SUPERFAMILY SSF52218: Flavoproteins SUPERFAMILY SSF102114: Radical SAM enzymes |
| Thi6p | Gene3D G3DSA:3.20.20.70: no description |
Gene3D G3DSA:3.40.1190.20: no description TIGRFAMs TIGR00694: thiM: hydroxyethylthiazole kinase TIGRFAMs TIGR00693: thiE: thiamine-phosphate pyrophosphorylase PRINTS PR01099: HYETHTZKNASE PANTHER PTHR20857:SF15: THIAMINE-PHOSPHATE PYROPHOSPHORYLASE PANTHER PTHR20857: THIAMINE-PHOSPHATE PYROPHOSPHORYLASE Pfam PF02110: HK Pfam PF02581: TMP-TENI SUPERFAMILY SSF51391: Thiamin phosphate synthase SUPERFAMILY SSF53613: Ribokinase-like |
This table lists domains/motifs that are unique to Rpe1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rpe1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Rpe1p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR11749 | RIBULOSE-5-PHOSPHATE-3-EPIMERASE |
| Pfam | PF00834 | Ribul_P_3_epim |
| TIGRFAMs | TIGR01163 | rpe: ribulose-phosphate 3-epimerase |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Rpe1p .
