This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Gyp6p domain/motif information see the external links section.

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This table lists proteins that share domains/motifs in common with those found in Gyp6p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Gyp6p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Gyp6p
Protein	Motifs in common with Gyp6p	Other motifs in this protein (but not in Gyp6p )
Gyp7p	SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Pfam PF00566: RabGAP-TBC	PANTHER PTHR22957:SF34: TBC1 DOMAIN FAMILY MEMBER 15, 17
Gyp8p	Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p	PANTHER PTHR20913:SF1: GTPASE-ACTIVATING PROTEIN GYP8 PANTHER PTHR20913: TBC1 DOMAIN FAMILY MEMBER 20/GTPASE
Mdr1p	PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description	PANTHER PTHR22957:SF48: GTPASE-ACTIVATING PROTEIN GYP2 Pfam PF02893: GRAM Pfam PF13405: EF_hand_4 SUPERFAMILY SSF47473: EF-hand SMART SM00568: domain in glucosyltransferases, myotubularin Gene3D G3DSA:1.10.238.10: no description
Oca5p	SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable	none
Bub2p	SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p Pfam PF00566: RabGAP-TBC PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Gene3D G3DSA:1.10.8.270: no description	PANTHER PTHR22957:SF85: SUBFAMILY NOT NAMED
Gyl1p	SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC	PANTHER PTHR22957:SF91: TBC DOMAIN CONTAINING PROTEIN
Msb3p	Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	PANTHER PTHR22957:SF54: GH REGULATED TBC PROTEIN-1
Msb4p	PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC	PANTHER PTHR22957:SF54: GH REGULATED TBC PROTEIN-1
Gyp1p	PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description	PANTHER PTHR22957:SF26: TBC1 DOMAIN FAMILY MEMBER 22A
Gyp5p	PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable	PANTHER PTHR22957:SF99: SUBFAMILY NOT NAMED

This table lists domains/motifs that are unique to Gyp6p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Gyp6p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Gyp6p
Database source	Accession number	Description
PANTHER	PTHR22957:SF16	GB DEF: GTPASE-ACTIVATING PROTEIN GYP6 (GAP FOR YPT6)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

The following external links can be used to directly search external databases for domain/motif information for Gyp6p .