VTC4/YJL012C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Vtc4p domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Vtc4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vtc4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Vtc4p
Protein	Motifs in common with Vtc4p	Other motifs in this protein (but not in Vtc4p )
Pho87p	Pfam PF03105: SPX	PANTHER PTHR10283:SF37: SODIUM/DICARBOXYLATE COTRANSPORTER-RELATED PANTHER PTHR10283: SOLUTE CARRIER FAMILY 13 MEMBER Pfam PF03600: CitMHS
Erd1p	PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED	Pfam PF03124: EXS PANTHER PTHR10783:SF27: SUBFAMILY NOT NAMED
Vtc1p	PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED Pfam PF02656: DUF202	PANTHER PTHR10783:SF1: VACUOLAR TRANSPORTER CHAPERONE 1
Vtc2p	Pfam PF09359: VTC Pfam PF03105: SPX Pfam PF02656: DUF202 PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED	PANTHER PTHR10783:SF21: VACUOLAR TRANSPORTER CHAPERONE 2
Pho81p	PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED Pfam PF03105: SPX	PANTHER PTHR10783:SF23: SUBFAMILY NOT NAMED SMART SM00248: ankyrin repeats Pfam PF12796: Ank_2 Gene3D G3DSA:1.25.40.20: no description Gene3D G3DSA:3.20.20.190: no description SUPERFAMILY SSF48403: Ankyrin repeat
Syg1p	PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED Pfam PF03105: SPX	PANTHER PTHR10783:SF4: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1 (PROTEIN SYG1 HOMOLOG)(XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR X3) Pfam PF03124: EXS
Pho90p	Pfam PF03105: SPX	Pfam PF00939: Na_sulph_symp PANTHER PTHR10283:SF37: SODIUM/DICARBOXYLATE COTRANSPORTER-RELATED PANTHER PTHR10283: SOLUTE CARRIER FAMILY 13 MEMBER
Pho91p	Pfam PF03105: SPX	PANTHER PTHR10283:SF37: SODIUM/DICARBOXYLATE COTRANSPORTER-RELATED PANTHER PTHR10283: SOLUTE CARRIER FAMILY 13 MEMBER Pfam PF00939: Na_sulph_symp
Vtc3p	PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED Pfam PF09359: VTC Pfam PF03105: SPX Pfam PF02656: DUF202	PANTHER PTHR10783:SF22: VACUOLAR TRANSPORTER CHAPERONE 3
Gde1p	Pfam PF03105: SPX	Gene3D G3DSA:1.25.40.20: no description Gene3D G3DSA:3.20.20.190: no description SMART SM00248: ankyrin repeats SUPERFAMILY SSF51695: PLC-like phosphodiesterases SUPERFAMILY SSF48403: Ankyrin repeat PANTHER PTHR22958: RELATED TO MULTIFUNCTIONAL CYCLIN-DEPENDENT KINASE-RELATED Pfam PF03009: GDPD Pfam PF12796: Ank_2

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Vtc4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vtc4p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Vtc4p
Database source	Accession number	Description
PANTHER	PTHR10783:SF20	VACUOLAR TRANSPORTER CHAPERONE 4

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	631 - 653
	658 - 677
	697 - 719

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Vtc4p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Vtc4p .