SOL4/YGR248W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Sol4p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Sol4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sol4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Sol4p
Protein	Motifs in common with Sol4p	Other motifs in this protein (but not in Sol4p )
Ach1p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like	Pfam PF02550: AcetylCoA_hydro Pfam PF13336: AcetylCoA_hyd_C Gene3D G3DSA:3.40.1080.10: no description Gene3D G3DSA:3.40.810.20: no description PANTHER PTHR21432:SF10: ACETYL-COA HYDROLASE PANTHER PTHR21432: ACETYL-COA HYDROLASE-RELATED
Sol2p	PANTHER PTHR11054: 6-PHOSPHOGLUCONOLACTONASE SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like Gene3D G3DSA:3.40.50.1360: no description TIGRFAMs TIGR01198: pgl: 6-phosphogluconolactonase Pfam PF01182: Glucosamine_iso	none
Fau1p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like	PIR superfamily PIRSF006806: Predicted 5-formyltetrahydrofolate cyclo-ligase Gene3D G3DSA:3.40.50.10420: no description Pfam PF01812: 5-FTHF_cyc-lig TIGRFAMs TIGR02727: MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase PANTHER PTHR23407:SF1: 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE PANTHER PTHR23407: ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
Gcd2p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like	Pfam PF01008: IF-2B PANTHER PTHR10233:SF14: TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA PANTHER PTHR10233: TRANSLATION INITIATION FACTOR EIF-2B Gene3D G3DSA:3.40.50.10470: no description
Sol3p	PANTHER PTHR11054: 6-PHOSPHOGLUCONOLACTONASE SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like TIGRFAMs TIGR01198: pgl: 6-phosphogluconolactonase Pfam PF01182: Glucosamine_iso Gene3D G3DSA:3.40.50.1360: no description	none
Gcn3p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like	Gene3D G3DSA:3.40.50.10470: no description Pfam PF01008: IF-2B PANTHER PTHR10233:SF7: TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA PANTHER PTHR10233: TRANSLATION INITIATION FACTOR EIF-2B
Gcd7p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like	Gene3D G3DSA:3.40.50.10470: no description Pfam PF01008: IF-2B PANTHER PTHR10233:SF9: TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA PANTHER PTHR10233: TRANSLATION INITIATION FACTOR EIF-2B
Sol1p	Pfam PF01182: Glucosamine_iso SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like Gene3D G3DSA:3.40.50.1360: no description TIGRFAMs TIGR01198: pgl: 6-phosphogluconolactonase PANTHER PTHR11054: 6-PHOSPHOGLUCONOLACTONASE	none
Rki1p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like Gene3D G3DSA:3.40.50.1360: no description	Pfam PF06026: Rib_5-P_isom_A PANTHER PTHR11934:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11934: RIBOSE-5-PHOSPHATE ISOMERASE TIGRFAMs TIGR00021: rpiA: ribose 5-phosphate isomerase A SUPERFAMILY SSF75445: D-ribose-5-phosphate isomerase (RpiA), lid domain Gene3D G3DSA:3.30.70.260: no description
Mri1p	SUPERFAMILY SSF100950: NagB/RpiA/CoA transferase-like	PANTHER PTHR10233:SF6: METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE (TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA/BETA/DELTA-LIKE PROTEIN) PANTHER PTHR10233: TRANSLATION INITIATION FACTOR EIF-2B TIGRFAMs TIGR00524: eIF-2B_rel: eIF-2B alpha/beta/delta-related unchar TIGRFAMs TIGR00512: salvage_mtnA: S-methyl-5-thioribose-1-phosphate is Gene3D G3DSA:1.20.120.420: no description Gene3D G3DSA:3.40.50.10470: no description Pfam PF01008: IF-2B

Unique domains/motifs

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This table lists domains/motifs that are unique to Sol4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sol4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Sol4p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Sol4p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Sol4p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Sol4p .