TFG1/YGR186W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Tfg1p domain/motif information see the external links section.

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Shared domains/motifs
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This table lists proteins that share domains/motifs in common with those found in Tfg1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tfg1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Tfg1p
Protein Motifs in common with Tfg1p Other motifs in this protein (but not in Tfg1p )
Tfg2p SUPERFAMILY SSF50916: Rap30/74 interaction domains
 Pfam PF02270: TFIIF_beta
PANTHER PTHR10445:SF0: GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2
PANTHER PTHR10445: GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2
SUPERFAMILY SSF46785: "Winged helix" DNA-binding domain
Gene3D G3DSA:1.10.10.10: no description

Unique domains/motifs
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This table lists domains/motifs that are unique to Tfg1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tfg1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Tfg1p
Database source Accession number Description
PANTHER PTHR13011 TFIIF-ALPHA
Pfam PF05793 TFIIF_alpha

Transmembrane Domains
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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Tfg1p .

Signal Peptide(s)
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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Tfg1p .

External Links
Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)


The following external links can be used to directly search external databases for domain/motif information for Tfg1p .