TIM13/YGR181W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Tim13p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Tim13p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tim13p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Tim13p
Protein	Motifs in common with Tim13p	Other motifs in this protein (but not in Tim13p )
Tim12p	SUPERFAMILY SSF144122: Tim10-like Gene3D G3DSA:1.10.287.810: no description Pfam PF02953: zf-Tim10_DDP	PANTHER PTHR11038:SF1: MITOCHONDRIAL REGULATOR OF SPLICING 5 PANTHER PTHR11038: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
Tim9p	Pfam PF02953: zf-Tim10_DDP SUPERFAMILY SSF144122: Tim10-like Gene3D G3DSA:1.10.287.810: no description	PANTHER PTHR10898:SF10: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9 PANTHER PTHR10898: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9
Tim10p	Pfam PF02953: zf-Tim10_DDP SUPERFAMILY SSF144122: Tim10-like Gene3D G3DSA:1.10.287.810: no description	PANTHER PTHR11038:SF8: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10 PANTHER PTHR11038: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
Tim8p	Gene3D G3DSA:1.10.287.810: no description SUPERFAMILY SSF144122: Tim10-like Pfam PF02953: zf-Tim10_DDP	PANTHER PTHR21535:SF2: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8 PANTHER PTHR21535: MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8

Unique domains/motifs

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This table lists domains/motifs that are unique to Tim13p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tim13p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Tim13p
Database source	Accession number	Description
PANTHER	PTHR19338	TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Tim13p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Tim13p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Tim13p .