TOM20/YGR082W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Tom20p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Tom20p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tom20p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no shared domains/motifs predicted for Tom20p .

Unique domains/motifs

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This table lists domains/motifs that are unique to Tom20p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tom20p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Tom20p
Database source	Accession number	Description
PRINTS	PR00351	OM20RECEPTOR
Gene3D	G3DSA:1.20.960.10	no description
PIR superfamily	PIRSF037707	Mitochondrial import receptor, TOM20 subunit
PANTHER	PTHR12430	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
PANTHER	PTHR12430:SF0	SUBFAMILY NOT NAMED
Pfam	PF02064	MAS20
TIGRFAMs	TIGR00985	3a0801s04tom: mitochondrial import receptor subuni
SUPERFAMILY	SSF47157	Mitochondrial import receptor subunit Tom20

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	7 - 29

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	1 - 26

External Links

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The following external links can be used to directly search external databases for domain/motif information for Tom20p .