RSC1/YGR056W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rsc1p domain/motif information see the external links section.


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Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Rsc1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rsc1p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Rsc1p
Protein Motifs in common with Rsc1p Other motifs in this protein (but not in Rsc1p )
Spt7p SUPERFAMILY SSF47370: Bromodomain
Gene3D G3DSA:1.20.920.10: no description
PRINTS PR00503: BROMODOMAIN
SMART SM00297: bromo domain
Pfam PF00439: Bromodomain
PANTHER PTHR22880:SF33: BROMODOMAIN-CONTAINING PROTEIN
PANTHER PTHR22880: FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Bdf2p Pfam PF00439: Bromodomain
Gene3D G3DSA:1.20.920.10: no description
PRINTS PR00503: BROMODOMAIN
SUPERFAMILY SSF47370: Bromodomain
SMART SM00297: bromo domain
PANTHER PTHR22880:SF32: BROMODOMAIN-CONTAINING PROTEIN
PANTHER PTHR22880: FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Snt2p Pfam PF01426: BAH
SMART SM00439: Bromo adjacent homology domain
SUPERFAMILY SSF57903: FYVE/PHD zinc finger
SUPERFAMILY SSF46689: Homeodomain-like
SUPERFAMILY SSF57783: Zinc beta-ribbon
Gene3D G3DSA:3.30.40.10: no description
Pfam PF00628: PHD
Pfam PF13832: zf-HC5HC2H_2
PANTHER PTHR13793:SF12: PHD FINGER PROTEIN
PANTHER PTHR13793: PHD FINGER PROTEINS
SMART SM00249: PHD zinc finger
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Gcn5p Pfam PF00439: Bromodomain
Gene3D G3DSA:1.20.920.10: no description
SUPERFAMILY SSF47370: Bromodomain
SMART SM00297: bromo domain
PRINTS PR00503: BROMODOMAIN
Pfam PF13508: Acetyltransf_7
PANTHER PTHR22880:SF6: HISTONE ACETYLTRANSFERASE GCN5
PANTHER PTHR22880: FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Gene3D G3DSA:3.40.630.30: no description
SUPERFAMILY SSF55729: Acyl-CoA N-acyltransferases (Nat)
Yta7p Gene3D G3DSA:1.20.920.10: no description
Pfam PF00439: Bromodomain
SUPERFAMILY SSF47370: Bromodomain
SMART SM00382: ATPases associated with a variety of cellula
Gene3D G3DSA:3.40.50.300: no description
Gene3D G3DSA:1.10.8.60: no description
PANTHER PTHR23069:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR23069: TAT-BINDING HOMOLOG 7
Pfam PF00004: AAA
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
Sth1p Pfam PF00439: Bromodomain
SUPERFAMILY SSF47370: Bromodomain
SMART SM00297: bromo domain
PRINTS PR00503: BROMODOMAIN
Gene3D G3DSA:1.20.920.10: no description
Pfam PF00176: SNF2_N
Pfam PF00271: Helicase_C
Pfam PF14619: SnAC
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR10799:SF209: GLOBAL TRANSCRIPTION ACTIVATOR SNF2L2 (ATP-DEPENDENT HELICASE SMARCA2)
PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED
SMART SM00487: DEAD-like helicases superfamily
SMART SM00490: helicase superfamily c-terminal domain
Gene3D G3DSA:3.40.50.300: no description
Rsc4p Gene3D G3DSA:1.20.920.10: no description
PRINTS PR00503: BROMODOMAIN
SMART SM00297: bromo domain
Pfam PF00439: Bromodomain
SUPERFAMILY SSF47370: Bromodomain
PANTHER PTHR16062: SWI/SNF-RELATED
PANTHER PTHR16062:SF1: SUBFAMILY NOT NAMED
Rsc58p Pfam PF00439: Bromodomain
Gene3D G3DSA:1.20.920.10: no description
none
Rsc2p SUPERFAMILY SSF47370: Bromodomain
Pfam PF00439: Bromodomain
Pfam PF01426: BAH
Gene3D G3DSA:1.20.920.10: no description
SMART SM00297: bromo domain
SMART SM00439: Bromo adjacent homology domain
PANTHER PTHR16062:SF3: SWI\/SNF RELATED
PANTHER PTHR16062: SWI/SNF-RELATED
PRINTS PR00503: BROMODOMAIN
none
Bdf1p SMART SM00297: bromo domain
Gene3D G3DSA:1.20.920.10: no description
PRINTS PR00503: BROMODOMAIN
SUPERFAMILY SSF47370: Bromodomain
Pfam PF00439: Bromodomain
PANTHER PTHR22880:SF32: BROMODOMAIN-CONTAINING PROTEIN
PANTHER PTHR22880: FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Sir3p SMART SM00439: Bromo adjacent homology domain
Pfam PF01426: BAH
SUPERFAMILY SSF82061: BAH domain
PANTHER PTHR10763:SF17: REGULATORY PROTEIN SIR3
PANTHER PTHR10763: CELL DIVISION CONTROL PROTEIN 6-RELATED
Orc1p Pfam PF01426: BAH
SMART SM00439: Bromo adjacent homology domain
SUPERFAMILY SSF82061: BAH domain
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
Pfam PF00004: AAA
SMART SM00382: ATPases associated with a variety of cellula
PANTHER PTHR10763:SF6: ORIGIN RECOGNITION COMPLEX SUBUNIT 1
PANTHER PTHR10763: CELL DIVISION CONTROL PROTEIN 6-RELATED
Gene3D G3DSA:3.40.50.300: no description
Gene3D G3DSA:1.10.8.60: no description
Snf2p Pfam PF00439: Bromodomain
SUPERFAMILY SSF47370: Bromodomain
Gene3D G3DSA:1.20.920.10: no description
PRINTS PR00503: BROMODOMAIN
SMART SM00297: bromo domain
Pfam PF00176: SNF2_N
Pfam PF00271: Helicase_C
Pfam PF14619: SnAC
Pfam PF08880: QLQ
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24
Gene3D G3DSA:3.40.50.300: no description
SMART SM00951: no description
SMART SM00487: DEAD-like helicases superfamily
SMART SM00490: helicase superfamily c-terminal domain
PANTHER PTHR10799:SF209: GLOBAL TRANSCRIPTION ACTIVATOR SNF2L2 (ATP-DEPENDENT HELICASE SMARCA2)
PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED

Unique domains/motifs


This table lists domains/motifs that are unique to Rsc1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rsc1p domain/motif information see the external links section.

Last updated on 2013-12-16

There are no unique domains/motifs predicted for Rsc1p .

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rsc1p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rsc1p .


The following external links can be used to directly search external databases for domain/motif information for Rsc1p .