RPL26B/YGR034W Domains/Motifs and Signal Peptides 
To directly search external databases for Rpl26bp domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Rpl26bp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rpl26bp domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl26bp | ||
|---|---|---|
| Protein | Motifs in common with Rpl26bp | Other motifs in this protein (but not in Rpl26bp ) |
| Rpl21ap | SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
PANTHER PTHR20981:SF0: SUBFAMILY NOT NAMED PANTHER PTHR20981: 60S RIBOSOMAL PROTEIN L21 Gene3D G3DSA:2.30.30.70: no description Pfam PF01157: Ribosomal_L21e |
| Img1p | SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
Pfam PF01245: Ribosomal_L19 PANTHER PTHR15680:SF4: SUBFAMILY NOT NAMED PANTHER PTHR15680: RIBOSOMAL PROTEIN L19 |
| Rpl27bp | Gene3D G3DSA:2.30.30.30: no description |
Pfam PF01777: Ribosomal_L27e ProDom PD009396: Q3E773_YEAST_Q3E773; PANTHER PTHR10497:SF0: 60S RIBOSOMAL PROTEIN L27 PANTHER PTHR10497: 60S RIBOSOMAL PROTEIN L27 |
| Hyp2p | Gene3D G3DSA:2.30.30.30: no description Pfam PF00467: KOW SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
Gene3D G3DSA:2.40.50.140: no description TIGRFAMs TIGR00037: eIF_5A: translation elongation factor IF5A Pfam PF01287: eIF-5a PANTHER PTHR11673: TRANSLATION INITIATION FACTOR 5A-RELATED SUPERFAMILY SSF50249: Nucleic acid-binding proteins PIR superfamily PIRSF003025: Translation initiation factor eIF-5A |
| Rml2p | Gene3D G3DSA:2.30.30.30: no description SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:4.10.950.10: no description Pfam PF03947: Ribosomal_L2_C Pfam PF00181: Ribosomal_L2 PANTHER PTHR13691:SF5: 50S RIBOSOMAL PROTEIN L2 PANTHER PTHR13691: RIBOSOMAL PROTEIN L2 TIGRFAMs TIGR01171: rplB_bact: ribosomal protein L2 SUPERFAMILY SSF50249: Nucleic acid-binding proteins |
| Rpl2ap | Gene3D G3DSA:2.30.30.30: no description SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
PANTHER PTHR13691:SF4: 60S RIBOSOMAL PROTEIN L8 PANTHER PTHR13691: RIBOSOMAL PROTEIN L2 Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:4.10.950.10: no description Pfam PF03947: Ribosomal_L2_C Pfam PF00181: Ribosomal_L2 SUPERFAMILY SSF50249: Nucleic acid-binding proteins PIR superfamily PIRSF002158: Ribosomal protein, L2p/L2a/L8e/organellar L2 types |
| Rpl14bp | Gene3D G3DSA:2.30.30.30: no description Pfam PF00467: KOW |
PANTHER PTHR11127:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11127: 60S RIBOSOMAL PROTEIN L14 Pfam PF01929: Ribosomal_L14e |
| Rpl27ap | Gene3D G3DSA:2.30.30.30: no description |
PANTHER PTHR10497: 60S RIBOSOMAL PROTEIN L27 ProDom PD009396: Q3E773_YEAST_Q3E773; Pfam PF01777: Ribosomal_L27e |
| Rps4bp | Pfam PF00467: KOW |
PANTHER PTHR11581:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11581: 30S/40S RIBOSOMAL PROTEIN S4 PIR superfamily PIRSF002116: Ribosomal protein S4a/S4e ProDom PD002667: RS4_YEAST_P05753; Pfam PF00900: Ribosomal_S4e Pfam PF08071: RS4NT Pfam PF01479: S4 SMART SM00363: S4 RNA-binding domain |
| Rpl2bp | SUPERFAMILY SSF50104: Translation proteins SH3-like domain Gene3D G3DSA:2.30.30.30: no description |
PANTHER PTHR13691:SF4: 60S RIBOSOMAL PROTEIN L8 PANTHER PTHR13691: RIBOSOMAL PROTEIN L2 Pfam PF03947: Ribosomal_L2_C Pfam PF00181: Ribosomal_L2 SUPERFAMILY SSF50249: Nucleic acid-binding proteins PIR superfamily PIRSF002158: Ribosomal protein, L2p/L2a/L8e/organellar L2 types Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:4.10.950.10: no description |
| Anb1p | Gene3D G3DSA:2.30.30.30: no description SUPERFAMILY SSF50104: Translation proteins SH3-like domain Pfam PF00467: KOW |
TIGRFAMs TIGR00037: eIF_5A: translation elongation factor IF5A PIR superfamily PIRSF003025: Translation initiation factor eIF-5A PANTHER PTHR11673: TRANSLATION INITIATION FACTOR 5A-RELATED Gene3D G3DSA:2.40.50.140: no description SUPERFAMILY SSF50249: Nucleic acid-binding proteins Pfam PF01287: eIF-5a |
| Rps4ap | Pfam PF00467: KOW |
PIR superfamily PIRSF002116: Ribosomal protein S4a/S4e Pfam PF00900: Ribosomal_S4e Pfam PF08071: RS4NT Pfam PF01479: S4 PANTHER PTHR11581:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11581: 30S/40S RIBOSOMAL PROTEIN S4 ProDom PD002667: RS4_YEAST_P05753; SMART SM00363: S4 RNA-binding domain |
| Rpl14ap | Pfam PF00467: KOW Gene3D G3DSA:2.30.30.30: no description |
Pfam PF01929: Ribosomal_L14e PANTHER PTHR11127:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11127: 60S RIBOSOMAL PROTEIN L14 |
| Rpl26ap | TIGRFAMs TIGR01080: rplX_A_E: ribosomal protein L24 Gene3D G3DSA:2.30.30.30: no description PANTHER PTHR11143: 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER Pfam PF00467: KOW SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
none |
| Rpl6bp | Gene3D G3DSA:2.30.30.30: no description |
Pfam PF01159: Ribosomal_L6e PANTHER PTHR10715: 60S RIBOSOMAL PROTEIN L6 |
| Spt5p | Pfam PF00467: KOW SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
Pfam PF03439: Spt5-NGN Pfam PF11942: Spt5_N PANTHER PTHR11125:SF7: SUBFAMILY NOT NAMED PANTHER PTHR11125: SUPPRESSOR OF TY 5 SMART SM00738: In Spt5p, this domain may confer affinity fo SMART SM00739: KOW (Kyprides, Ouzounis, Woese) motif. SMART SM01104: Spt5 C-terminal nonapeptide repeat binding S PIR superfamily PIRSF036945: Transcription elongation factor Spt5 |
| Rpl6ap | Gene3D G3DSA:2.30.30.30: no description |
Pfam PF01159: Ribosomal_L6e PANTHER PTHR10715: 60S RIBOSOMAL PROTEIN L6 |
| Rpl21bp | SUPERFAMILY SSF50104: Translation proteins SH3-like domain |
Gene3D G3DSA:2.30.30.70: no description Pfam PF01157: Ribosomal_L21e PANTHER PTHR20981:SF0: SUBFAMILY NOT NAMED PANTHER PTHR20981: 60S RIBOSOMAL PROTEIN L21 |
| Mrpl40p | Gene3D G3DSA:2.30.30.30: no description |
SMART SM00739: KOW (Kyprides, Ouzounis, Woese) motif. |
This table lists domains/motifs that are unique to Rpl26bp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rpl26bp domain/motif information see the external links section.
Last updated on 2013-05-06
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Rpl26bp .
