DOC1/YGL240W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Doc1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Doc1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Doc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Doc1p
Protein	Motifs in common with Doc1p	Other motifs in this protein (but not in Doc1p )
Dal2p	SUPERFAMILY SSF49785: Galactose-binding domain-like Gene3D G3DSA:2.60.120.260: no description	TIGRFAMs TIGR02961: allantoicase: allantoicase PIR superfamily PIRSF016516: Allantoicase PANTHER PTHR12045: ALLANTOICASE Pfam PF03561: Allantoicase
Kex2p	Gene3D G3DSA:2.60.120.260: no description SUPERFAMILY SSF49785: Galactose-binding domain-like	PANTHER PTHR10795:SF8: KEXIN 2 (YEAST)-RELATED PANTHER PTHR10795: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN Gene3D G3DSA:3.40.50.200: no description Pfam PF00082: Peptidase_S8 Pfam PF01483: P_proprotein SUPERFAMILY SSF52743: Subtilisin-like PRINTS PR00723: SUBTILISIN
Slp1p	SUPERFAMILY SSF49785: Galactose-binding domain-like Gene3D G3DSA:2.60.120.260: no description	PANTHER PTHR12953: MEMBRANE PROTEIN CH1 RELATED Pfam PF07738: Sad1_UNC

Unique domains/motifs

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This table lists domains/motifs that are unique to Doc1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Doc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Doc1p
Database source	Accession number	Description
PANTHER	PTHR12936	ANAPHASE-PROMOTING COMPLEX 10
Pfam	PF03256	APC10

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Doc1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Doc1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Doc1p .