EMC4/YGL231C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Emc4p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Emc4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Emc4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no shared domains/motifs predicted for Emc4p .

Unique domains/motifs

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This table lists domains/motifs that are unique to Emc4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Emc4p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Emc4p
Database source	Accession number	Description
PIR superfamily	PIRSF017207	Predicted transmembrane protein 85
PANTHER	PTHR19315	FAMILY NOT NAMED
PANTHER	PTHR19315:SF2	GB DEF: HYPOTHETICAL 21.5 KDA PROTEIN IN SEC15-SAP4 INTERGENIC REGION
Pfam	PF06417	DUF1077

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	88 - 110
	137 - 156

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Emc4p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Emc4p .