VID30/YGL227W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Vid30p domain/motif information see the external links section.

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Shared domains/motifs
Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)


This table lists proteins that share domains/motifs in common with those found in Vid30p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vid30p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Vid30p
Protein Motifs in common with Vid30p Other motifs in this protein (but not in Vid30p )
Cne1p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 Pfam PF00262: Calreticulin
PRINTS PR00626: CALRETICULIN
SUPERFAMILY SSF63887: P-domain of calnexin/calreticulin
Gene3D G3DSA:2.60.120.200: no description
PANTHER PTHR11073:SF1: CALNEXIN
PANTHER PTHR11073: CALRETICULIN AND CALNEXIN
Rmd5p Pfam PF10607: CLTH
SMART SM00668: C-terminal to LisH motif.
 Pfam PF13445: zf-RING_LisH
PANTHER PTHR12170:SF3: SPORULATION PROTEIN RMD5-RELATED (GLUCOSE-INDUCED DEGRADATION PROTEIN 2)
PANTHER PTHR12170: MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
Gene3D G3DSA:3.30.40.10: no description
Utr2p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 Gene3D G3DSA:2.60.120.200: no description
PIR superfamily PIRSF037299: Predicted glycosidase CRH1
Pfam PF00722: Glyco_hydro_16
PANTHER PTHR31910: FAMILY NOT NAMED
Emp47p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 PANTHER PTHR12223:SF9: PROTEIN EMP47
PANTHER PTHR12223: VESICULAR MANNOSE-BINDING LECTIN
Pfam PF03388: Lectin_leg-like
Gene3D G3DSA:2.60.120.200: no description
PIR superfamily PIRSF018136: L-type lectin, yeast type
Skn1p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 Gene3D G3DSA:2.60.120.200: no description
PANTHER PTHR31361:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR31361: FAMILY NOT NAMED
Pfam PF03935: SKN1
Crh1p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 Pfam PF00722: Glyco_hydro_16
Gene3D G3DSA:2.60.120.200: no description
PANTHER PTHR10963:SF14: BETA-GLUCANASE
PANTHER PTHR10963: GLYCOSYL HYDROLASE-RELATED
PIR superfamily PIRSF037299: Predicted glycosidase CRH1
Fyv10p SMART SM00668: C-terminal to LisH motif.
Pfam PF10607: CLTH
 Pfam PF13445: zf-RING_LisH
PANTHER PTHR12170:SF2: ERYTHROBLAST MACROPHAGE PROTEIN EMP
PANTHER PTHR12170: MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
Suc2p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 SMART SM00640: Glycosyl hydrolases family
Gene3D G3DSA:2.60.120.560: no description
PANTHER PTHR30175:SF0: INVERTASE-RELATED
PANTHER PTHR30175: INVERTASE-RELATED
Pfam PF00251: Glyco_hydro_32N
Pfam PF08244: Glyco_hydro_32C
SUPERFAMILY SSF75005: Arabinanase/levansucrase/invertase
Ree1p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 Gene3D G3DSA:2.60.120.200: no description
Pfam PF07081: DUF1349
PIR superfamily PIRSF022704: Uncharacterised conserved protein, UCP022704 type
Ssh4p PANTHER PTHR12864: RAN BINDING PROTEIN 9-RELATED
SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
Pfam PF00622: SPRY
SMART SM00449: Domain in SPla and the RYanodine Receptor.
 PANTHER PTHR12864:SF2: UNCHARACTERIZED
Uip5p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 PANTHER PTHR12223:SF2: GB DEF: HYPOTHETICAL 51.0 KDA PROTEIN IN GAP1-NAP1 INTERGENIC REGION
PANTHER PTHR12223: VESICULAR MANNOSE-BINDING LECTIN
Gene3D G3DSA:2.60.120.200: no description
Pfam PF03388: Lectin_leg-like
Bre2p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
SMART SM00449: Domain in SPla and the RYanodine Receptor.
 PANTHER PTHR10598: SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2
Emp46p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 PIR superfamily PIRSF018136: L-type lectin, yeast type
PANTHER PTHR12223:SF1: GB DEF: S.CEREVISIAE CHROMOSOME XII READING FRAME ORF YLR080W (YLR080WP)
PANTHER PTHR12223: VESICULAR MANNOSE-BINDING LECTIN
Pfam PF03388: Lectin_leg-like
Gene3D G3DSA:2.60.120.200: no description
Crr1p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 PRINTS PR00737: GLHYDRLASE16
PANTHER PTHR10963:SF14: BETA-GLUCANASE
PANTHER PTHR10963: GLYCOSYL HYDROLASE-RELATED
Pfam PF00722: Glyco_hydro_16
Gene3D G3DSA:2.60.120.200: no description
Gid8p PANTHER PTHR12864: RAN BINDING PROTEIN 9-RELATED
SMART SM00668: C-terminal to LisH motif.
SMART SM00757: CT11-RanBPM
Pfam PF10607: CLTH
 PANTHER PTHR12864:SF4: PREDICTED: HYPOTHETICAL PROTEIN
Ear1p PANTHER PTHR12864: RAN BINDING PROTEIN 9-RELATED
SMART SM00449: Domain in SPla and the RYanodine Receptor.
Pfam PF00622: SPRY
SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 PANTHER PTHR12864:SF2: UNCHARACTERIZED
Kre6p SUPERFAMILY SSF49899: Concanavalin A-like lectins/glucanases
 PANTHER PTHR31361:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR31361: FAMILY NOT NAMED
Pfam PF03935: SKN1
Gene3D G3DSA:2.60.120.200: no description

Unique domains/motifs
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This table lists domains/motifs that are unique to Vid30p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vid30p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Vid30p .

Transmembrane Domains
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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Vid30p .

Signal Peptide(s)
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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Vid30p .

External Links
Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)


The following external links can be used to directly search external databases for domain/motif information for Vid30p .