VRG4/YGL225W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Vrg4p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Vrg4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vrg4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Vrg4p
Protein	Motifs in common with Vrg4p	Other motifs in this protein (but not in Vrg4p )
Thi74p	SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	Pfam PF00892: EamA PANTHER PTHR23051:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23051: SOLUTE CARRIER FAMILY 35, MEMBER F5
Yea4p	Pfam PF08449: UAA SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE TIGRFAMs TIGR00803: nst: UDP-galactose transporter	PANTHER PTHR10778:SF4: UDP-XYLOSE AND UDP-N-ACETYLGLUCOSAMINE TRANSPORTER (SOLUTE CARRIER FAMILY 35 MEMBER B4) PANTHER PTHR10778: SOLUTE CARRIER FAMILY 35 MEMBER B
Hvg1p	Pfam PF08449: UAA TIGRFAMs TIGR00803: nst: UDP-galactose transporter PANTHER PTHR11132: SOLUTE CARRIER FAMILY 35 SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	none
Yjl193wp	PANTHER PTHR11132: SOLUTE CARRIER FAMILY 35 SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	PANTHER PTHR11132:SF14: SUBFAMILY NOT NAMED Pfam PF03151: TPT
Yml018cp	Pfam PF08449: UAA SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	PANTHER PTHR23051:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23051: SOLUTE CARRIER FAMILY 35, MEMBER F5
Ymd8p	PANTHER PTHR11132: SOLUTE CARRIER FAMILY 35 SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	PANTHER PTHR11132:SF14: SUBFAMILY NOT NAMED Pfam PF03151: TPT Pfam PF13536: EmrE
Ymr253cp	SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	Pfam PF00892: EamA PANTHER PTHR22911:SF6: TRANSPORTER, DRUG/METABOLITE EXPORTER FAMILY PANTHER PTHR22911: ACYL-MALONYL CONDENSING ENZYME-RELATED
Sly41p	SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE PANTHER PTHR11132: SOLUTE CARRIER FAMILY 35	TIGRFAMs TIGR00817: tpt: Tpt phosphate/phosphoenolpyruvate translocato PANTHER PTHR11132:SF14: SUBFAMILY NOT NAMED Pfam PF03151: TPT
Hut1p	SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE Pfam PF08449: UAA	PANTHER PTHR10778:SF10: SOLUTE CARRIER FAMILY 35 MEMBER B1 (UDP-GALACTOSE TRANSPORTER-RELATED PROTEIN 1)(UGTREL1) PANTHER PTHR10778: SOLUTE CARRIER FAMILY 35 MEMBER B
Ypl264cp	SUPERFAMILY SSF103481: Multidrug resistance efflux transporter EmrE	PANTHER PTHR22911:SF6: TRANSPORTER, DRUG/METABOLITE EXPORTER FAMILY PANTHER PTHR22911: ACYL-MALONYL CONDENSING ENZYME-RELATED Pfam PF00892: EamA

Unique domains/motifs

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This table lists domains/motifs that are unique to Vrg4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vrg4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Vrg4p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	23 - 45
	52 - 74
	89 - 111
	116 - 138
	184 - 201
	222 - 241
	251 - 273
	280 - 302
	306 - 325

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Vrg4p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Vrg4p .