To directly search external databases for Hos2p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Hos2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Hos2p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Hos2p | ||
|---|---|---|
| Protein | Motifs in common with Hos2p | Other motifs in this protein (but not in Hos2p ) |
| Hda1p | Pfam PF00850: Hist_deacetyl PANTHER PTHR10625: HISTONE DEACETYLASE Gene3D G3DSA:3.40.800.20: no description PRINTS PR01270: HDASUPER SUPERFAMILY SSF52768: Arginase/deacetylase |
Pfam PF09757: Arb2 PIR superfamily PIRSF037919: Histone deacetylase class II, yeast type PANTHER PTHR10625:SF22: HISTONE DEACETYLASE |
| Rpd3p | PIR superfamily PIRSF037913: Histone deacetylase class I, eukaryotic type SUPERFAMILY SSF52768: Arginase/deacetylase Pfam PF00850: Hist_deacetyl Gene3D G3DSA:3.40.800.20: no description PRINTS PR01271: HISDACETLASE PRINTS PR01270: HDASUPER PANTHER PTHR10625: HISTONE DEACETYLASE |
PANTHER PTHR10625:SF65: HISTONE DEACETYLASE RPD3 |
| Car1p | SUPERFAMILY SSF52768: Arginase/deacetylase |
TIGRFAMs TIGR01229: rocF_arginase: arginase Gene3D G3DSA:3.40.800.10: no description PANTHER PTHR11358:SF2: ARGINASE PANTHER PTHR11358: ARGINASE/AGMATINASE PRINTS PR00116: ARGINASE Pfam PF00491: Arginase |
| Hos3p | Gene3D G3DSA:3.40.800.20: no description Pfam PF00850: Hist_deacetyl PRINTS PR01270: HDASUPER PANTHER PTHR10625: HISTONE DEACETYLASE SUPERFAMILY SSF52768: Arginase/deacetylase |
PANTHER PTHR10625:SF15: HISTONE DEACETYLASE HOS3 |
| Hos1p | Pfam PF00850: Hist_deacetyl PANTHER PTHR10625: HISTONE DEACETYLASE Gene3D G3DSA:3.40.800.20: no description SUPERFAMILY SSF52768: Arginase/deacetylase PRINTS PR01270: HDASUPER |
PANTHER PTHR10625:SF11: HISTONE DEACETYLASE HOS1 |
This table lists domains/motifs that are unique to Hos2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Hos2p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Hos2p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR10625:SF64 | HISTONE DEACETYLASE HOS2 |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Hos2p .


