RPL9A/YGL147C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rpl9ap domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Rpl9ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl9ap domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl9ap
Protein	Motifs in common with Rpl9ap	Other motifs in this protein (but not in Rpl9ap )
Mrpl6p	Gene3D G3DSA:3.90.930.12: no description SUPERFAMILY SSF56053: Ribosomal protein L6 PANTHER PTHR11655: 60S/50S RIBOSOMAL PROTEIN L6/L9 Pfam PF00347: Ribosomal_L6	PRINTS PR00059: RIBOSOMALL6 PANTHER PTHR11655:SF5: GB DEF: 60S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL PRECURSOR (YML16) (MRP-L6)
Rpl9bp	SUPERFAMILY SSF56053: Ribosomal protein L6 PANTHER PTHR11655:SF2: 60S RIBOSOMAL PROTEIN L9 PANTHER PTHR11655: 60S/50S RIBOSOMAL PROTEIN L6/L9 PIR superfamily PIRSF002162: Ribosomal protein, L6p/L6a/L9e/organellar L9 types Pfam PF00347: Ribosomal_L6 Gene3D G3DSA:3.90.930.12: no description	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Rpl9ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl9ap domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rpl9ap .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rpl9ap .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rpl9ap .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rpl9ap .