RAD6/YGL058W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rad6p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Rad6p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rad6p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rad6p
Protein	Motifs in common with Rad6p	Other motifs in this protein (but not in Rad6p )
Ubc4p	Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d	PANTHER PTHR24068: FAMILY NOT NAMED
Stp22p	SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description	PANTHER PTHR23306:SF1: GB DEF: SUPPRESSOR PROTEIN STP22 OF TEMPERATURE-SENSITIVE ALPHA-FACTOR RECEPTOR AND ARGI PANTHER PTHR23306: TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED Pfam PF05743: UEV Pfam PF09454: Vps23_core SUPERFAMILY SSF140111: Endosomal sorting complex assembly domain
Yih1p	SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description	PANTHER PTHR16301: IMPACT-RELATED SMART SM00591: no description SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like Gene3D G3DSA:3.30.230.30: no description Pfam PF01205: UPF0029 Pfam PF05773: RWD
Ubc9p	Pfam PF00179: UQ_con PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Gene3D G3DSA:3.10.110.10: no description SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like	PANTHER PTHR24067:SF51: SUMO-CONJUGATING ENZYME UBC9
Cdc34p	SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Gene3D G3DSA:3.10.110.10: no description Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d	PANTHER PTHR24067:SF4: UBIQUITIN CARRIER PROTEIN
Ubc5p	SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d	PANTHER PTHR24068: FAMILY NOT NAMED
Ubc13p	Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Pfam PF00179: UQ_con	PANTHER PTHR24067:SF31: UBIQUITIN-CONJUGATING ENZYME E2 N
Gir2p	Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like	SMART SM00591: no description Pfam PF05773: RWD PANTHER PTHR12292: RWD DOMAIN-CONTAINING PROTEIN
Ubc1p	SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Pfam PF00179: UQ_con	Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like PANTHER PTHR24067:SF29: UBIQUITIN-CONJUGATING ENZYME E2 K Pfam PF09288: UBA_3
Gcn2p	Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like	Gene3D G3DSA:1.10.510.10: no description Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Pfam PF12745: HGTP_anticodon2 Pfam PF00069: Pkinase Pfam PF05773: RWD Pfam PF13393: tRNA-synt_His SMART SM00591: no description SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00219: Tyrosine kinase, catalytic domain PANTHER PTHR11042:SF40: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 1 PANTHER PTHR11042: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE (EIF2-ALPHA KINASE)-RELATED PIR superfamily PIRSF000660: Serine/threonine-protein kinase, GCN2 type
Ubc8p	SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Gene3D G3DSA:3.10.110.10: no description Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d	PANTHER PTHR24067:SF0: UBIQUITIN-CONJUGATING ENZYME E2 H
Ubc6p	Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like	PANTHER PTHR24067:SF42: UBIQUITIN-CONJUGATING ENZYME E2 J2
Mms2p	Pfam PF00179: UQ_con PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SUPERFAMILY SSF54495: UBC-like SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Gene3D G3DSA:3.10.110.10: no description	PANTHER PTHR24067:SF46: UBIQUITIN-CONJUGATING ENZYME VARIANT
Pex4p	SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description	PANTHER PTHR24067:SF61: UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
Ubc12p	SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SUPERFAMILY SSF54495: UBC-like	PANTHER PTHR24067:SF39: NEDD8-CONJUGATING ENZYME UBC12
Ylr419wp	SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description	SMART SM00165: Ubiquitin associated domain SMART SM00591: no description SMART SM00487: DEAD-like helicases superfamily SMART SM00490: helicase superfamily c-terminal domain SMART SM00847: Helicase associated domain (HA2) Add an ann PANTHER PTHR18934:SF68: SUBFAMILY NOT NAMED PANTHER PTHR18934: ATP-DEPENDENT RNA HELICASE SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases Gene3D G3DSA:3.40.50.300: no description Pfam PF07717: OB_NTP_bind Pfam PF05773: RWD Pfam PF00271: Helicase_C Pfam PF00270: DEAD Pfam PF04408: HA2
Ubc7p	PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description	PANTHER PTHR24067:SF63: UBIQUITIN-CONJUGATING ENZYME E2 G2
Ubc11p	PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like	PANTHER PTHR24067:SF44: UBIQUITIN-CONJUGATING ENZYME E2 C

Unique domains/motifs

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This table lists domains/motifs that are unique to Rad6p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rad6p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Rad6p
Database source	Accession number	Description
PANTHER	PTHR24067:SF26	UBIQUITIN-CONJUGATING ENZYME E2 A, B

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rad6p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rad6p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Rad6p .