CWH41/YGL027C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Cwh41p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Cwh41p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cwh41p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Cwh41p
Protein	Motifs in common with Cwh41p	Other motifs in this protein (but not in Cwh41p )
Nth2p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	Pfam PF01204: Trehalase Pfam PF07492: Trehalase_Ca-bi PRINTS PR00744: GLHYDRLASE37 PANTHER PTHR23403:SF1: ALPHA,ALPHA-TREHALASE PANTHER PTHR23403: TREHALASE
Nth1p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	PRINTS PR00744: GLHYDRLASE37 Pfam PF01204: Trehalase Pfam PF07492: Trehalase_Ca-bi PANTHER PTHR23403:SF1: ALPHA,ALPHA-TREHALASE PANTHER PTHR23403: TREHALASE
Sga1p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	Gene3D G3DSA:1.50.10.10: no description Pfam PF00723: Glyco_hydro_15 PRINTS PR00736: GLHYDRLASE15
Dcw1p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	PANTHER PTHR31771: FAMILY NOT NAMED Gene3D G3DSA:1.50.10.10: no description PIR superfamily PIRSF016302: Mannan endo-1,6-alpha-mannosidase Pfam PF03663: Glyco_hydro_76
Ymr196wp	SUPERFAMILY SSF48208: Six-hairpin glycosidases	PANTHER PTHR32415:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32415: FAMILY NOT NAMED
Dfg5p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	PANTHER PTHR31771: FAMILY NOT NAMED PIR superfamily PIRSF016302: Mannan endo-1,6-alpha-mannosidase Gene3D G3DSA:1.50.10.10: no description Pfam PF03663: Glyco_hydro_76
Ath1p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	Pfam PF03632: Glyco_hydro_65m Pfam PF03636: Glyco_hydro_65N Pfam PF03633: Glyco_hydro_65C PANTHER PTHR11051:SF4: SUBFAMILY NOT NAMED PANTHER PTHR11051: GLYCOSYL HYDROLASE-RELATED Gene3D G3DSA:2.70.98.40: no description Gene3D G3DSA:1.50.10.10: no description
Gdb1p	SUPERFAMILY SSF48208: Six-hairpin glycosidases	TIGRFAMs TIGR01531: glyc_debranch: glycogen debranching enzyme Gene3D G3DSA:3.20.20.80: no description SUPERFAMILY SSF51445: (Trans)glycosidases PANTHER PTHR10569: GLYCOGEN DEBRANCHING ENZYME Pfam PF06202: GDE_C Pfam PF00128: Alpha-amylase

Unique domains/motifs

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This table lists domains/motifs that are unique to Cwh41p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cwh41p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Cwh41p
Database source	Accession number	Description
PANTHER	PTHR10412	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
PANTHER	PTHR10412:SF1	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Pfam	PF03200	Glyco_hydro_63

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Cwh41p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

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External Links

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The following external links can be used to directly search external databases for domain/motif information for Cwh41p .