VPS72/YDR485C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Vps72p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Vps72p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vps72p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Vps72p
Protein	Motifs in common with Vps72p	Other motifs in this protein (but not in Vps72p )
Ies6p	Pfam PF08265: YL1_C SMART SM00993: YL1 nuclear protein C-terminal domain	none
Mss51p	SMART SM00993: YL1 nuclear protein C-terminal domain	PANTHER PTHR32558:SF1: UNCHARACTERIZED PANTHER PTHR32558: UNCHARACTERIZED Pfam PF13824: zf-Mss51

Unique domains/motifs

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This table lists domains/motifs that are unique to Vps72p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vps72p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Vps72p
Database source	Accession number	Description
PANTHER	PTHR13275	YL-1 PROTEIN (TRANSCRIPTION FACTOR-LIKE 1)
Pfam	PF05764	YL1

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Vps72p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Vps72p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Vps72p .