PPM1/YDR435C Domains/Motifs and Signal Peptides 
To directly search external databases for Ppm1p domain/motif information see the external links section.
| Click on image for expanded interactive view |
|---|
This table lists proteins that share domains/motifs in common with those found in Ppm1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ppm1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Ppm1p | ||
|---|---|---|
| Protein | Motifs in common with Ppm1p | Other motifs in this protein (but not in Ppm1p ) |
| Ncl1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PRINTS PR02008: RCMTFAMILY PRINTS PR02011: RCMTNCL1 Pfam PF01189: Nol1_Nop2_Fmu PANTHER PTHR22808:SF1: PUTATIVE METHYLTRANSFERASE NCL1(YEAST)-RELATED PANTHER PTHR22808: NCL1(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING |
| Hmt1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF13847: Methyltransf_31 Gene3D G3DSA:2.70.160.11: no description PANTHER PTHR11006:SF19: PROTEIN ARGININE N-METHYLTRANSFERASE 1, 4 PANTHER PTHR11006: PROTEIN ARGININE N-METHYLTRANSFERASE |
| Trm7p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF01728: FtsJ PANTHER PTHR10920: RIBOSOMAL RNA METHYLTRANSFERASE |
| Hsl7p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Gene3D G3DSA:2.70.160.11: no description PANTHER PTHR10738: PROTEIN ARGININE N-METHYLTRANSFERASE 5 Pfam PF05185: PRMT5 PIR superfamily PIRSF015894: Arginine N-methyltransferase, PRMT5 type |
| Bmt2p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF11968: DUF3321 |
| Ybr225wp | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
none |
| Abd1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF03291: Pox_MCEL PIR superfamily PIRSF028762: mRNA (guanine-N(7))-methyltransferase PANTHER PTHR12189: MRNA (GUANINE-7-)METHYLTRANSFERASE |
| Tae1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PANTHER PTHR12753:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12753: AD-003 - RELATED Pfam PF05891: Methyltransf_PK PIR superfamily PIRSF016958: Predicted S-adenosyl-L-methionine dependent methyltransferase, AD-003 type |
| Efm2p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR14614:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14614: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN Pfam PF10294: Methyltransf_16 |
| Spb1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR10920:SF13: RRNA METHYLTRANSFERASE 3 PANTHER PTHR10920: RIBOSOMAL RNA METHYLTRANSFERASE Pfam PF07780: Spb1_C Pfam PF11861: DUF3381 Pfam PF01728: FtsJ |
| Bud23p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR12734:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12734: METHYLTRANSFERASE-RELATED Pfam PF12589: WBS_methylT Pfam PF08241: Methyltransf_11 |
| Nop1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PRINTS PR00052: FIBRILLARIN Gene3D G3DSA:3.30.200.20: no description PANTHER PTHR10335: RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN Pfam PF01269: Fibrillarin PIR superfamily PIRSF006540: Fibrillarin |
| Trm8p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PANTHER PTHR23417:SF1: TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE PANTHER PTHR23417: 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE TIGRFAMs TIGR00091: TIGR00091: tRNA (guanine-N(7)-)-methyltransferase Pfam PF02390: Methyltransf_4 |
| Rrp8p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF05148: Methyltransf_8 PANTHER PTHR12787:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12787: UNCHARACTERIZED |
| Trm1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF02005: TRM PANTHER PTHR10631:SF0: N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE PANTHER PTHR10631: N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE TIGRFAMs TIGR00308: TRM1: N2,N2-dimethylguanosine tRNA methyltransfera |
| Mtq2p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
TIGRFAMs TIGR00537: hemK_rel_arch: putative methylase PANTHER PTHR18895:SF8: N6-DNA-METHYLTRANSFERASE PANTHER PTHR18895: METHYLTRANSFERASE Pfam PF13659: Methyltransf_26 |
| Oms1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR10108:SF43: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR10108: METHYLTRANSFERASE Pfam PF13489: Methyltransf_23 |
| Dot1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF08123: DOT1 PANTHER PTHR21451: HISTONE H3 METHYLTRANSFERASE |
| Rmt2p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PIR superfamily PIRSF038148: Arginine N-methyltransferase 2 PANTHER PTHR32379:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32379: FAMILY NOT NAMED |
| Tmt1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PANTHER PTHR10108:SF168: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR10108: METHYLTRANSFERASE Pfam PF13847: Methyltransf_31 |
| Mrm2p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF01728: FtsJ PIR superfamily PIRSF005461: 23S ribosomal RNA methyltransferase PANTHER PTHR10920:SF11: RIBOSOMAL RNA METHYLTRANSFERASE 2 PANTHER PTHR10920: RIBOSOMAL RNA METHYLTRANSFERASE |
| Ime4p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF05063: MT-A70 PANTHER PTHR12829:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12829: N6-ADENOSINE-METHYLTRANSFERASE |
| Trm5p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF02475: Met_10 Gene3D G3DSA:3.30.300.110: no description PANTHER PTHR23245:SF25: METHIONINE 10+ HOMOLOG PANTHER PTHR23245: UNCHARACTERIZED |
| Crg1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR10108:SF167: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR10108: METHYLTRANSFERASE Pfam PF08241: Methyltransf_11 |
| See1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF13847: Methyltransf_31 PANTHER PTHR12843:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12843: UNCHARACTERIZED |
| Hpm1p | Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR21095: UNCHARACTERIZED |
| Gcd14p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF08704: GCD14 Gene3D G3DSA:3.10.330.20: no description PANTHER PTHR12133:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12133: UNCHARACTERIZED METHYLTRANSFERASE PIR superfamily PIRSF017269: tRNA methyltransferase, GCD14 type |
| Yjr129cp | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF10294: Methyltransf_16 PANTHER PTHR23109: UNCHARACTERIZED |
| Rsm22p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PIR superfamily PIRSF007797: Mitochondrial ribosomal protein, fungal Rsm22 type PANTHER PTHR13184: 37S RIBOSOMAL PROTEIN S22, MITOCHONDRIAL Pfam PF09243: Rsm22 |
| Trm2p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PANTHER PTHR11061:SF21: TRNA (URACIL-5-)-METHYLTRANSFERASE PANTHER PTHR11061: RNA M5U METHYLTRANSFERASE FAMILY Gene3D G3DSA:2.40.50.140: no description SUPERFAMILY SSF50249: Nucleic acid-binding proteins Pfam PF05958: tRNA_U5-meth_tr Pfam PF01938: TRAM |
| Rkm5p | Gene3D G3DSA:3.40.50.150: no description |
none |
| Spe4p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF01564: Spermine_synth PANTHER PTHR11558:SF11: SPERMIDINE SYNTHASE PANTHER PTHR11558: SPERMIDINE/SPERMINE SYNTHASE TIGRFAMs TIGR00417: speE: spermidine synthase Gene3D G3DSA:2.30.140.10: no description |
| Nnt1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF10294: Methyltransf_16 PANTHER PTHR14614:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14614: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| Trm12p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR23245: UNCHARACTERIZED Pfam PF02475: Met_10 |
| Erg6p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF08498: Sterol_MT_C Pfam PF08241: Methyltransf_11 PANTHER PTHR10108:SF21: S-ADENOSYL-L-METHIONINE:DELTA24-STEROL-C-METHYLTRANSFERASE PANTHER PTHR10108: METHYLTRANSFERASE |
| Trm9p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR13069: UNCHARACTERIZED Pfam PF08241: Methyltransf_11 |
| Coq5p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
TIGRFAMs TIGR01934: MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesi Pfam PF01209: Ubie_methyltran PANTHER PTHR10108:SF24: UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERASE PANTHER PTHR10108: METHYLTRANSFERASE |
| Mtf1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PIR superfamily PIRSF011649: Mitochondrial transcription factor mtTFB Pfam PF00398: RrnaAD Gene3D G3DSA:1.10.8.100: no description |
| Ynl022cp | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PANTHER PTHR22807:SF4: WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN 20 PANTHER PTHR22807: NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING Pfam PF01189: Nol1_Nop2_Fmu PRINTS PR02008: RCMTFAMILY |
| Ynl024cp | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF10294: Methyltransf_16 PANTHER PTHR14614:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14614: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| Nop2p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
TIGRFAMs TIGR00446: nop2p: NOL1/NOP2/sun family putative RNA methylase PANTHER PTHR22807:SF11: NUCLEOLAR PROTEIN NOL1/NOP2(YEAST) PANTHER PTHR22807: NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING Pfam PF01189: Nol1_Nop2_Fmu PRINTS PR02008: RCMTFAMILY PRINTS PR02012: RCMTNOP2 |
| Mtq1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF05175: MTS PANTHER PTHR18895:SF7: HEMK METHYLTRANSFERASE FAMILY MEMBER PANTHER PTHR18895: METHYLTRANSFERASE TIGRFAMs TIGR00536: hemK_fam: methyltransferase, HemK family |
| Ynl092wp | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR12303: UNCHARACTERIZED Pfam PF07942: N2227 |
| Coq3p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
TIGRFAMs TIGR01983: UbiG: 3-demethylubiquinone-9 3-O-methyltransferase PANTHER PTHR23134:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23134: HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE Pfam PF13489: Methyltransf_23 |
| Trm11p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF01170: UPF0020 PRINTS PR00507: N12N6MTFRASE PANTHER PTHR13370:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13370: RNA METHYLASE-RELATED PIR superfamily PIRSF017259: tRNA guanosine-2'-O-methyltransferase, TRM11 type |
| Ppm2p | Gene3D G3DSA:3.40.50.150: no description PANTHER PTHR13600:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13600: LEUCINE CARBOXYL METHYLTRANSFERASE SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Pfam PF04072: LCM |
Gene3D G3DSA:2.120.10.80: no description SUPERFAMILY SSF50965: Galactose oxidase, central domain SMART SM00612: no description Pfam PF13418: Kelch_4 |
| Abp140p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
PANTHER PTHR22809:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22809: METHYLTRANSFERASE-RELATED Pfam PF13489: Methyltransf_23 |
| Tgs1p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
Pfam PF09445: Methyltransf_15 PANTHER PTHR14741:SF6: P2573 PROTEIN PANTHER PTHR14741: S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED |
| Dim1p | Gene3D G3DSA:3.40.50.150: no description SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases |
Pfam PF00398: RrnaAD TIGRFAMs TIGR00755: ksgA: dimethyladenosine transferase PANTHER PTHR11727:SF7: SUBFAMILY NOT NAMED PANTHER PTHR11727: DIMETHYLADENOSINE TRANSFERASE SMART SM00650: Ribosomal RNA adenine dimethylases |
| Spe3p | SUPERFAMILY SSF53335: S-adenosyl-L-methionine-dependent methyltransferases Gene3D G3DSA:3.40.50.150: no description |
PANTHER PTHR11558:SF11: SPERMIDINE SYNTHASE PANTHER PTHR11558: SPERMIDINE/SPERMINE SYNTHASE TIGRFAMs TIGR00417: speE: spermidine synthase Pfam PF01564: Spermine_synth Gene3D G3DSA:2.30.140.10: no description |
This table lists domains/motifs that are unique to Ppm1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ppm1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Ppm1p | ||
|---|---|---|
| Database source | Accession number | Description |
| PIR superfamily | PIRSF016305 | Leucine carboxyl methyltransferase, LCMT1 type |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Ppm1p .
