MUS81/YDR386W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Mus81p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Mus81p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mus81p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Mus81p
Protein	Motifs in common with Mus81p	Other motifs in this protein (but not in Mus81p )
Mms4p	SMART SM00891: ERCC4 domain	none
Rad10p	SUPERFAMILY SSF52980: Restriction endonuclease-like	ProDom PD013585: RAD10_YEAST_P06838; PANTHER PTHR12749:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12749: EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 TIGRFAMs TIGR00597: rad10: DNA repair protein rad10 Pfam PF03834: Rad10
Rad1p	Gene3D G3DSA:3.40.50.10130: no description SMART SM00891: ERCC4 domain SUPERFAMILY SSF52980: Restriction endonuclease-like	TIGRFAMs TIGR00596: rad1: DNA repair protein (rad1) PANTHER PTHR10150: DNA REPAIR ENDONUCLEASE XPF SUPERFAMILY SSF47781: RuvA domain 2-like

Unique domains/motifs

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This table lists domains/motifs that are unique to Mus81p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mus81p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Mus81p
Database source	Accession number	Description
PANTHER	PTHR13451	CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81
Pfam	PF02732	ERCC4

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Mus81p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Mus81p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Mus81p .