RTN1/YDR233C Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rtn1p domain/motif information see the external links section.

Proteome Browser
Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)


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Shared domains/motifs
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This table lists proteins that share domains/motifs in common with those found in Rtn1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rtn1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rtn1p
Protein Motifs in common with Rtn1p Other motifs in this protein (but not in Rtn1p )
Rtn2p Pfam PF02453: Reticulon
PANTHER PTHR10994:SF17: RETICULON-RELATED (YEAST)
PANTHER PTHR10994: RETICULON
 none

Unique domains/motifs
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This table lists domains/motifs that are unique to Rtn1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rtn1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rtn1p .

Transmembrane Domains
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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view) Amino Acid Coordinate(s)
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51 - 73
143 - 165

Signal Peptide(s)
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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rtn1p .

External Links
Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)


The following external links can be used to directly search external databases for domain/motif information for Rtn1p .