SDH4/YDR178W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Sdh4p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Sdh4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sdh4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Sdh4p
Protein	Motifs in common with Sdh4p	Other motifs in this protein (but not in Sdh4p )
Sdh3p	Gene3D G3DSA:1.20.1300.10: no description	PANTHER PTHR10978: SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT SUPERFAMILY SSF81343: Fumarate reductase respiratory complex transmembrane subunits Pfam PF01127: Sdh_cyt Gene3D G3DSA:1.20.5.540: no description
Shh4p	PANTHER PTHR13337:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13337: SUCCINATE DEHYDROGENASE Pfam PF05328: CybS Gene3D G3DSA:1.20.1300.10: no description	none
Shh3p	Gene3D G3DSA:1.20.1300.10: no description	Pfam PF01127: Sdh_cyt SUPERFAMILY SSF81343: Fumarate reductase respiratory complex transmembrane subunits TIGRFAMs TIGR02970: succ_dehyd_cytB: succinate dehydrogenase, cytochro PANTHER PTHR10978: SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT
Tim18p	Gene3D G3DSA:1.20.1300.10: no description Pfam PF05328: CybS PANTHER PTHR13337:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13337: SUCCINATE DEHYDROGENASE	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Sdh4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sdh4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Sdh4p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	74 - 96
	132 - 149

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Sdh4p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Sdh4p .