UBC1/YDR177W Domains/Motifs and Signal Peptides 
To directly search external databases for Ubc1p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Ubc1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ubc1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Ubc1p | ||
|---|---|---|
| Protein | Motifs in common with Ubc1p | Other motifs in this protein (but not in Ubc1p ) |
| Ede1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
SUPERFAMILY SSF47473: EF-hand SMART SM00027: Eps15 homology domain SMART SM00054: EF-hand, calcium binding motif SMART SM00165: Ubiquitin associated domain Pfam PF12763: efhand_3 Pfam PF00627: UBA PANTHER PTHR11216:SF10: UNCHARACTERIZED PANTHER PTHR11216: EH DOMAIN Gene3D G3DSA:1.10.238.10: no description |
| Shp1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
SMART SM00553: Domain present in Saccharomyces cerevisiae S SMART SM00166: Domain present in ubiquitin-regulatory prote Pfam PF08059: SEP Pfam PF00789: UBX PANTHER PTHR23333:SF5: UBX DOMAIN CONTAINING PROTEIN PANTHER PTHR23333: UBX DOMAIN CONTAINING PROTEIN SUPERFAMILY SSF54236: Ubiquitin-like SUPERFAMILY SSF102848: NSFL1 (p97 ATPase) cofactor p47, SEP domain Gene3D G3DSA:3.10.20.90: no description |
| Ubp14p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z SMART SM00165: Ubiquitin associated domain Gene3D G3DSA:3.30.40.10: no description PIR superfamily PIRSF016308: Ubiquitin-specific protease (ubiquitin carboxyl-terminal hydrolase) SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006:SF175: HYPOTHETICAL PROTEIN PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH Pfam PF02148: zf-UBP Pfam PF00627: UBA |
| Ubc4p | Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d |
PANTHER PTHR24068: FAMILY NOT NAMED |
| Stp22p | SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description |
PANTHER PTHR23306:SF1: GB DEF: SUPPRESSOR PROTEIN STP22 OF TEMPERATURE-SENSITIVE ALPHA-FACTOR RECEPTOR AND ARGI PANTHER PTHR23306: TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED Pfam PF05743: UEV Pfam PF09454: Vps23_core SUPERFAMILY SSF140111: Endosomal sorting complex assembly domain |
| Yih1p | SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description |
PANTHER PTHR16301: IMPACT-RELATED SMART SM00591: no description SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like Gene3D G3DSA:3.30.230.30: no description Pfam PF01205: UPF0029 Pfam PF05773: RWD |
| Ubc9p | Pfam PF00179: UQ_con PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Gene3D G3DSA:3.10.110.10: no description SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like |
PANTHER PTHR24067:SF51: SUMO-CONJUGATING ENZYME UBC9 |
| Cdc34p | SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Gene3D G3DSA:3.10.110.10: no description Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d |
PANTHER PTHR24067:SF4: UBIQUITIN CARRIER PROTEIN |
| Ubc5p | SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d |
PANTHER PTHR24068: FAMILY NOT NAMED |
| Ubc13p | Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Pfam PF00179: UQ_con |
PANTHER PTHR24067:SF31: UBIQUITIN-CONJUGATING ENZYME E2 N |
| Gir2p | Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like |
SMART SM00591: no description Pfam PF05773: RWD PANTHER PTHR12292: RWD DOMAIN-CONTAINING PROTEIN |
| Don1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
SMART SM00546: Domain that may be involved in binding ubiqu Pfam PF02845: CUE |
| Gcn2p | Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like |
Gene3D G3DSA:1.10.510.10: no description Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Pfam PF12745: HGTP_anticodon2 Pfam PF00069: Pkinase Pfam PF05773: RWD Pfam PF13393: tRNA-synt_His SMART SM00591: no description SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00219: Tyrosine kinase, catalytic domain PANTHER PTHR11042:SF40: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 1 PANTHER PTHR11042: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE (EIF2-ALPHA KINASE)-RELATED PIR superfamily PIRSF000660: Serine/threonine-protein kinase, GCN2 type |
| Swa2p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
PANTHER PTHR23172:SF19: AUXILIN PANTHER PTHR23172: AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED Pfam PF09145: Ubiq-assoc Gene3D G3DSA:1.25.40.10: no description Gene3D G3DSA:1.10.287.110: no description SUPERFAMILY SSF46565: Chaperone J-domain SUPERFAMILY SSF48452: TPR-like |
| Ubx5p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
Pfam PF13899: Thioredoxin_7 Pfam PF00789: UBX SMART SM00594: no description SMART SM00166: Domain present in ubiquitin-regulatory prote Gene3D G3DSA:3.40.30.10: no description Gene3D G3DSA:3.10.20.90: no description PANTHER PTHR23322:SF6: FAS-ASSOCIATED FACTOR-RELATED PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN SUPERFAMILY SSF54236: Ubiquitin-like |
| Ubc8p | SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Gene3D G3DSA:3.10.110.10: no description Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d |
PANTHER PTHR24067:SF0: UBIQUITIN-CONJUGATING ENZYME E2 H |
| Rad23p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF00627: UBA Pfam PF00240: ubiquitin Pfam PF09280: XPC-binding SUPERFAMILY SSF54236: Ubiquitin-like SUPERFAMILY SSF101238: XPC-binding domain Gene3D G3DSA:3.10.20.90: no description Gene3D G3DSA:1.10.10.540: no description PRINTS PR01839: RAD23PROTEIN PANTHER PTHR10621:SF0: UV EXCISION REPAIR PROTEIN RAD23 PANTHER PTHR10621: UV EXCISION REPAIR PROTEIN RAD23 SMART SM00213: Ubiquitin homologues SMART SM00165: Ubiquitin associated domain SMART SM00727: Heat shock chaperonin-binding motif. TIGRFAMs TIGR00601: rad23: UV excision repair protein Rad23 |
| Ubc6p | Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like |
PANTHER PTHR24067:SF42: UBIQUITIN-CONJUGATING ENZYME E2 J2 |
| Ddi1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF09668: Asp_protease Pfam PF00627: UBA SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description PANTHER PTHR12917:SF1: DNA-DAMAGE INDUCIBLE PROTEIN DDI1 (V-SNARE-MASTER 1) PANTHER PTHR12917: ASPARTYL PROTEASE DDI-RELATED SMART SM00165: Ubiquitin associated domain |
| Rad6p | Pfam PF00179: UQ_con SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 |
PANTHER PTHR24067:SF26: UBIQUITIN-CONJUGATING ENZYME E2 A, B |
| Mms2p | Pfam PF00179: UQ_con PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SUPERFAMILY SSF54495: UBC-like SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Gene3D G3DSA:3.10.110.10: no description |
PANTHER PTHR24067:SF46: UBIQUITIN-CONJUGATING ENZYME VARIANT |
| Gts1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF01412: ArfGap Pfam PF00627: UBA SMART SM00105: Putative GTP-ase activating proteins for the SMART SM00165: Ubiquitin associated domain PANTHER PTHR23180:SF23: CENTAURIN/ARF-RELATED PANTHER PTHR23180: CENTAURIN/ARF SUPERFAMILY SSF57863: ArfGap/RecO-like zinc finger PRINTS PR00405: REVINTRACTNG |
| Pex4p | SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description |
PANTHER PTHR24067:SF61: UBIQUITIN-CONJUGATING ENZYME E2-21 KDA |
| Egd2p | Gene3D G3DSA:1.10.8.10: no description |
PIR superfamily PIRSF015901: Nascent polypeptide-associated complex, alpha subunit PANTHER PTHR21713:SF0: SUBFAMILY NOT NAMED PANTHER PTHR21713: NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Pfam PF01849: NAC Pfam PF00627: UBA |
| Cue2p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
SMART SM00546: Domain that may be involved in binding ubiqu SMART SM00463: Small MutS-related domain Pfam PF02845: CUE Pfam PF01713: Smr |
| Dcn1p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
PANTHER PTHR12281:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12281: RP42 RELATED Pfam PF03556: Cullin_binding |
| Ubc12p | SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SUPERFAMILY SSF54495: UBC-like |
PANTHER PTHR24067:SF39: NEDD8-CONJUGATING ENZYME UBC12 |
| Ylr419wp | SUPERFAMILY SSF54495: UBC-like Gene3D G3DSA:3.10.110.10: no description |
SMART SM00165: Ubiquitin associated domain SMART SM00591: no description SMART SM00487: DEAD-like helicases superfamily SMART SM00490: helicase superfamily c-terminal domain SMART SM00847: Helicase associated domain (HA2) Add an ann PANTHER PTHR18934:SF68: SUBFAMILY NOT NAMED PANTHER PTHR18934: ATP-DEPENDENT RNA HELICASE SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases Gene3D G3DSA:3.40.50.300: no description Pfam PF07717: OB_NTP_bind Pfam PF05773: RWD Pfam PF00271: Helicase_C Pfam PF00270: DEAD Pfam PF04408: HA2 |
| Ubx2p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF00789: UBX PANTHER PTHR23322:SF14: UBX DOMAIN CONTAINING PROTEIN (FRAGMENT) PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN Gene3D G3DSA:3.10.20.90: no description SMART SM00166: Domain present in ubiquitin-regulatory prote |
| Vps9p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF02204: VPS9 Pfam PF02845: CUE SUPERFAMILY SSF109993: VPS9 domain SMART SM00167: Domain present in VPS9 SMART SM00546: Domain that may be involved in binding ubiqu PANTHER PTHR23101:SF25: SUBFAMILY NOT NAMED PANTHER PTHR23101: RAB GDP/GTP EXCHANGE FACTOR |
| Ubc7p | PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d SUPERFAMILY SSF54495: UBC-like Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description |
PANTHER PTHR24067:SF63: UBIQUITIN-CONJUGATING ENZYME E2 G2 |
| Dsk2p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SMART SM00727: Heat shock chaperonin-binding motif. SMART SM00165: Ubiquitin associated domain SUPERFAMILY SSF54236: Ubiquitin-like Pfam PF00240: ubiquitin Pfam PF00627: UBA PANTHER PTHR10677: UBIQUILIN |
| Cue5p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF02845: CUE SMART SM00546: Domain that may be involved in binding ubiqu |
| Rup1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF00627: UBA SMART SM00165: Ubiquitin associated domain PANTHER PTHR10175: UBA DOMAIN-CONTAINING PROTEIN RUP1-RELATED |
| Ubc11p | PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Pfam PF00179: UQ_con Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like |
PANTHER PTHR24067:SF44: UBIQUITIN-CONJUGATING ENZYME E2 C |
| Mex67p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
PANTHER PTHR10662:SF22: MRNA EXPORT FACTOR MEX67 PANTHER PTHR10662: NUCLEAR RNA EXPORT FACTOR SMART SM00804: C-terminal domain of vertebrate Tap protein Gene3D G3DSA:3.80.10.10: no description Gene3D G3DSA:3.10.450.50: no description SUPERFAMILY SSF54427: NTF2-like SUPERFAMILY SSF52058: L domain-like Pfam PF03943: TAP_C |
This table lists domains/motifs that are unique to Ubc1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ubc1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Ubc1p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR24067:SF29 | UBIQUITIN-CONJUGATING ENZYME E2 K |
| Pfam | PF09288 | UBA_3 |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Ubc1p .
