KGD2/YDR148C Domains/Motifs and Signal Peptides 
To directly search external databases for Kgd2p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Kgd2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Kgd2p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Kgd2p | ||
|---|---|---|
| Protein | Motifs in common with Kgd2p | Other motifs in this protein (but not in Kgd2p ) |
| Gcv3p | Gene3D G3DSA:2.40.50.100: no description SUPERFAMILY SSF51230: Single hybrid motif |
Pfam PF01597: GCV_H TIGRFAMs TIGR00527: gcvH: glycine cleavage system H protein PANTHER PTHR11715:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11715: GLYCINE CLEAVAGE SYSTEM H PROTEIN |
| Yat1p | SUPERFAMILY SSF52777: CoA-dependent acyltransferases |
PANTHER PTHR22589:SF16: CARNITINE O-ACYLTRANSFERASE PANTHER PTHR22589: CARNITINE O-ACYLTRANSFERASE Pfam PF00755: Carn_acyltransf |
| Lys2p | SUPERFAMILY SSF52777: CoA-dependent acyltransferases |
PIR superfamily PIRSF001617: L-aminoadipate-semialdehyde dehydrogenase, large subunit Gene3D G3DSA:3.40.50.980: no description Gene3D G3DSA:2.30.38.10: no description Gene3D G3DSA:3.30.300.30: no description Gene3D G3DSA:1.10.1200.10: no description Gene3D G3DSA:3.40.50.720: no description SUPERFAMILY SSF56801: Acetyl-CoA synthetase-like SUPERFAMILY SSF51735: NAD(P)-binding Rossmann-fold domains SUPERFAMILY SSF47336: ACP-like PANTHER PTHR24095:SF38: SUBFAMILY NOT NAMED PANTHER PTHR24095: FAMILY NOT NAMED Pfam PF00501: AMP-binding Pfam PF07993: NAD_binding_4 Pfam PF00550: PP-binding SMART SM00823: Phosphopantetheine attachment site TIGRFAMs TIGR03443: alpha_am_amid: L-aminoadipate-semialdehyde dehydro TIGRFAMs TIGR01733: AA-adenyl-dom: amino acid adenylation domain TIGRFAMs TIGR01746: Thioester-redct: thioester reductase domain |
| Dur1,2p | SUPERFAMILY SSF51230: Single hybrid motif Pfam PF00364: Biotin_lipoyl Gene3D G3DSA:2.40.50.100: no description |
PANTHER PTHR18866:SF41: SUBFAMILY NOT NAMED PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SUPERFAMILY SSF75304: Amidase signature (AS) enzymes SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif Pfam PF01425: Amidase Pfam PF02626: AHS2 Pfam PF02786: CPSase_L_D2 Pfam PF02682: AHS1 Pfam PF00289: CPSase_L_chain Pfam PF02785: Biotin_carb_C SMART SM00878: Biotin carboxylase C-terminal domain SMART SM00797: Allophanate hydrolase subunit SMART SM00796: Allophanate hydrolase subunit TIGRFAMs TIGR02712: urea_carbox: urea carboxylase TIGRFAMs TIGR02713: allophanate_hyd: allophanate hydrolase TIGRFAMs TIGR00724: urea_amlyse_rel: biotin-dependent carboxylase unch Gene3D G3DSA:3.90.1300.10: no description Gene3D G3DSA:3.10.490.10: no description Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:2.40.100.10: no description Gene3D G3DSA:3.30.1360.40: no description |
| Pyc2p | SUPERFAMILY SSF51230: Single hybrid motif Pfam PF00364: Biotin_lipoyl Gene3D G3DSA:2.40.50.100: no description |
SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF89000: post-HMGL domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif Pfam PF02786: CPSase_L_D2 Pfam PF02436: PYC_OADA Pfam PF00289: CPSase_L_chain Pfam PF02785: Biotin_carb_C Pfam PF00682: HMGL-like Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:3.20.20.70: no description Gene3D G3DSA:1.10.10.60: no description Gene3D G3DSA:3.10.600.10: no description PIR superfamily PIRSF001594: Pyruvate carboxylase PANTHER PTHR18866:SF10: PYRUVATE CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SMART SM00878: Biotin carboxylase C-terminal domain TIGRFAMs TIGR01235: pyruv_carbox: pyruvate carboxylase |
| Yat2p | SUPERFAMILY SSF52777: CoA-dependent acyltransferases |
Pfam PF00755: Carn_acyltransf PANTHER PTHR22589:SF4: CARNITINE O-ACYLTRANSFERASE PANTHER PTHR22589: CARNITINE O-ACYLTRANSFERASE |
| Pyc1p | Gene3D G3DSA:2.40.50.100: no description Pfam PF00364: Biotin_lipoyl SUPERFAMILY SSF51230: Single hybrid motif |
PANTHER PTHR18866:SF10: PYRUVATE CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SMART SM00878: Biotin carboxylase C-terminal domain Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:3.20.20.70: no description Gene3D G3DSA:1.10.10.60: no description Gene3D G3DSA:3.10.600.10: no description PIR superfamily PIRSF001594: Pyruvate carboxylase TIGRFAMs TIGR01235: pyruv_carbox: pyruvate carboxylase Pfam PF02786: CPSase_L_D2 Pfam PF02436: PYC_OADA Pfam PF00289: CPSase_L_chain Pfam PF02785: Biotin_carb_C Pfam PF00682: HMGL-like SUPERFAMILY SSF51569: Aldolase SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF89000: post-HMGL domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif |
| Pdx1p | SUPERFAMILY SSF51230: Single hybrid motif PANTHER PTHR23151: DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Gene3D G3DSA:2.40.50.100: no description Pfam PF00364: Biotin_lipoyl |
SUPERFAMILY SSF47005: Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex PANTHER PTHR23151:SF17: PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT, MITOCHONDRIAL Gene3D G3DSA:4.10.320.10: no description |
| Sli1p | SUPERFAMILY SSF52777: CoA-dependent acyltransferases |
Pfam PF07247: AATase |
| Ayt1p | Gene3D G3DSA:3.30.559.10: no description |
Pfam PF02458: Transferase |
| Cat2p | SUPERFAMILY SSF52777: CoA-dependent acyltransferases |
Pfam PF00755: Carn_acyltransf PANTHER PTHR22589:SF10: CARNITINE O-ACYLTRANSFERASE PANTHER PTHR22589: CARNITINE O-ACYLTRANSFERASE |
| Hfa1p | SUPERFAMILY SSF51230: Single hybrid motif Gene3D G3DSA:2.40.50.100: no description Pfam PF00364: Biotin_lipoyl |
SUPERFAMILY SSF52096: ClpP/crotonase SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:3.90.226.10: no description SMART SM00878: Biotin carboxylase C-terminal domain PANTHER PTHR18866:SF6: ACETYL-COA CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE Pfam PF08326: ACC_central Pfam PF01039: Carboxyl_trans Pfam PF02786: CPSase_L_D2 Pfam PF02785: Biotin_carb_C Pfam PF00289: CPSase_L_chain |
| Mrp7p | Gene3D G3DSA:2.40.50.100: no description |
Pfam PF01016: Ribosomal_L27 ProDom PD003114: RM02_YEAST_P12687; TIGRFAMs TIGR00062: L27: ribosomal protein L27 PANTHER PTHR15893: RIBOSOMAL PROTEIN L27 PRINTS PR00063: RIBOSOMALL27 SUPERFAMILY SSF110324: Ribosomal L27 protein |
| Lat1p | SUPERFAMILY SSF52777: CoA-dependent acyltransferases SUPERFAMILY SSF51230: Single hybrid motif Gene3D G3DSA:2.40.50.100: no description Gene3D G3DSA:3.30.559.10: no description PANTHER PTHR23151: DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Pfam PF00198: 2-oxoacid_dh Pfam PF00364: Biotin_lipoyl |
SUPERFAMILY SSF47005: Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex TIGRFAMs TIGR01349: PDHac_trf_mito: pyruvate dehydrogenase complex dih Gene3D G3DSA:4.10.320.10: no description PANTHER PTHR23151:SF24: BCCP/BCCP-1/BCCP1/CAC1-A/CAC1A BIOTIN CARBOXYL CARRIER, BIOTIN CARBOXYL CARRIE Pfam PF02817: E3_binding |
| Acc1p | SUPERFAMILY SSF51230: Single hybrid motif Pfam PF00364: Biotin_lipoyl Gene3D G3DSA:2.40.50.100: no description |
SMART SM00878: Biotin carboxylase C-terminal domain PANTHER PTHR18866:SF6: ACETYL-COA CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SUPERFAMILY SSF52096: ClpP/crotonase SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif Pfam PF08326: ACC_central Pfam PF01039: Carboxyl_trans Pfam PF02786: CPSase_L_D2 Pfam PF00289: CPSase_L_chain Pfam PF02785: Biotin_carb_C Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:3.90.226.10: no description |
This table lists domains/motifs that are unique to Kgd2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Kgd2p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Kgd2p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR23151:SF8 | DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX |
| TIGRFAMs | TIGR01347 | sucB: dihydrolipoyllysine-residue succinyltransfer |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Kgd2p .
