RPL35A/YDL191W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rpl35ap domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Rpl35ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl35ap domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl35ap
Protein	Motifs in common with Rpl35ap	Other motifs in this protein (but not in Rpl35ap )
Rpl35bp	Gene3D G3DSA:1.10.287.310: no description PANTHER PTHR13872:SF2: 60S RIBOSOMAL PROTEIN L35 PANTHER PTHR13872: 60S RIBOSOMAL PROTEIN L35 SUPERFAMILY SSF46561: Ribosomal protein L29 (L29p) TIGRFAMs TIGR00012: L29: ribosomal protein L29 Pfam PF00831: Ribosomal_L29	none
Stt3p	PANTHER PTHR13872: 60S RIBOSOMAL PROTEIN L35	Pfam PF02516: STT3 PANTHER PTHR13872:SF15: SUBFAMILY NOT NAMED

Unique domains/motifs

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This table lists domains/motifs that are unique to Rpl35ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl35ap domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rpl35ap .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rpl35ap .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rpl35ap .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rpl35ap .