ATG9/YDL149W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Atg9p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Atg9p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Atg9p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no shared domains/motifs predicted for Atg9p .

Unique domains/motifs

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This table lists domains/motifs that are unique to Atg9p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Atg9p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Atg9p
Database source	Accession number	Description
PANTHER	PTHR13038	APG9 AUTOPHAGY 9
PANTHER	PTHR13038:SF10	AUTOPHAGY PROTEIN 9
Pfam	PF04109	APG9

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	316 - 338
	373 - 395
	536 - 558
	620 - 642
	652 - 671
	725 - 747

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Atg9p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Atg9p .