PMT1/YDL095W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Pmt1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Pmt1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pmt1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Pmt1p
Protein	Motifs in common with Pmt1p	Other motifs in this protein (but not in Pmt1p )
Pmt2p	SMART SM00472: Domain in ryanodine and inositol trisphospha Pfam PF02366: PMT Pfam PF02815: MIR SUPERFAMILY SSF82109: MIR domain Gene3D G3DSA:2.80.10.50: no description PANTHER PTHR10050: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE	PANTHER PTHR10050:SF16: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 2
Pmt5p	PANTHER PTHR10050: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE SUPERFAMILY SSF82109: MIR domain Gene3D G3DSA:2.80.10.50: no description SMART SM00472: Domain in ryanodine and inositol trisphospha Pfam PF02366: PMT Pfam PF02815: MIR	PANTHER PTHR10050:SF13: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 5
Pmt7p	SMART SM00472: Domain in ryanodine and inositol trisphospha Gene3D G3DSA:2.80.10.50: no description SUPERFAMILY SSF82109: MIR domain Pfam PF02815: MIR PANTHER PTHR10050: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE	PANTHER PTHR10050:SF2: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 7
Pmt6p	SMART SM00472: Domain in ryanodine and inositol trisphospha Pfam PF02366: PMT Pfam PF02815: MIR SUPERFAMILY SSF82109: MIR domain Gene3D G3DSA:2.80.10.50: no description PANTHER PTHR10050: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE	PANTHER PTHR10050:SF15: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 6
Pmt4p	SMART SM00472: Domain in ryanodine and inositol trisphospha PANTHER PTHR10050: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE SUPERFAMILY SSF82109: MIR domain Pfam PF02366: PMT Pfam PF02815: MIR Gene3D G3DSA:2.80.10.50: no description	PANTHER PTHR10050:SF17: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 4
Pmt3p	SUPERFAMILY SSF82109: MIR domain Gene3D G3DSA:2.80.10.50: no description PANTHER PTHR10050: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE Pfam PF02366: PMT Pfam PF02815: MIR SMART SM00472: Domain in ryanodine and inositol trisphospha	PANTHER PTHR10050:SF14: DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 3

Unique domains/motifs

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This table lists domains/motifs that are unique to Pmt1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pmt1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Pmt1p
Database source	Accession number	Description
PANTHER	PTHR10050:SF12	DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 1

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	51 - 70
	139 - 161
	181 - 203
	235 - 254
	274 - 296
	589 - 611
	623 - 642
	657 - 679
	686 - 708

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Pmt1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Pmt1p .