SLM3/YDL033C Domains/Motifs and Signal Peptides 
To directly search external databases for Slm3p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Slm3p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Slm3p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Slm3p | ||
|---|---|---|
| Protein | Motifs in common with Slm3p | Other motifs in this protein (but not in Slm3p ) |
| Fun12p | Gene3D G3DSA:2.40.30.10: no description |
TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF52156: Initiation factor IF2/eIF5b, domain 3 SUPERFAMILY SSF50447: Translation proteins PANTHER PTHR23115:SF41: TRANSLATION INITIATION FACTOR IF-2 PANTHER PTHR23115: TRANSLATION FACTOR Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.40.50.10050: no description PRINTS PR00315: ELONGATNFCT Pfam PF00009: GTP_EFTU Pfam PF11987: IF-2 Pfam PF03144: GTP_EFTU_D2 |
| Ils1p | Gene3D G3DSA:3.40.50.620: no description |
Gene3D G3DSA:3.90.740.10: no description Gene3D G3DSA:1.10.730.10: no description PRINTS PR00984: TRNASYNTHILE TIGRFAMs TIGR00392: ileS: isoleucine--tRNA ligase SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF50677: ValRS/IleRS/LeuRS editing domain SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases PANTHER PTHR11946:SF11: SUBFAMILY NOT NAMED PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES Pfam PF00133: tRNA-synt_1 Pfam PF08264: Anticodon_1 |
| Tef2p | Gene3D G3DSA:2.40.30.10: no description |
TIGRFAMs TIGR00483: EF-1_alpha: translation elongation factor EF-1, su PANTHER PTHR23115:SF37: ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) PANTHER PTHR23115: TRANSLATION FACTOR Gene3D G3DSA:3.40.50.300: no description SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50465: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain SUPERFAMILY SSF50447: Translation proteins Pfam PF00009: GTP_EFTU Pfam PF03143: GTP_EFTU_D3 Pfam PF03144: GTP_EFTU_D2 PRINTS PR00315: ELONGATNFCT |
| Pof1p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF52374: Nucleotidylyl transferase |
| Fad1p | Gene3D G3DSA:3.40.50.620: no description SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like |
Pfam PF01507: PAPS_reduct PANTHER PTHR23293:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23293: FAD SYNTHETASE-RELATED (FMN ADENYLYLTRANSFERASE) |
| Sup35p | Gene3D G3DSA:2.40.30.10: no description |
Pfam PF00009: GTP_EFTU Pfam PF03143: GTP_EFTU_D3 Pfam PF03144: GTP_EFTU_D2 SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50465: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain SUPERFAMILY SSF50447: Translation proteins PANTHER PTHR23115:SF36: EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-BINDING SUBUNIT (ERF2) (TRANSLATION RELEASE FACTOR 3) (ERF3) (ERF-3) PANTHER PTHR23115: TRANSLATION FACTOR PRINTS PR01343: YEASTERF PRINTS PR00315: ELONGATNFCT Gene3D G3DSA:3.40.50.300: no description |
| Msw1p | Gene3D G3DSA:3.40.50.620: no description |
PRINTS PR01039: TRNASYNTHTRP Gene3D G3DSA:1.10.240.10: no description Pfam PF00579: tRNA-synt_1b SUPERFAMILY SSF52374: Nucleotidylyl transferase TIGRFAMs TIGR00233: trpS: tryptophan--tRNA ligase PANTHER PTHR10055: TRYPTOPHANYL-TRNA SYNTHETASE |
| Ydr341cp | Gene3D G3DSA:3.40.50.620: no description |
PRINTS PR01038: TRNASYNTHARG SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF55190: Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases TIGRFAMs TIGR00456: argS: arginine--tRNA ligase SMART SM01016: Arginyl tRNA synthetase N terminal do SMART SM00836: DALR anticodon binding domain Gene3D G3DSA:3.30.1360.70: no description Gene3D G3DSA:1.10.730.10: no description PANTHER PTHR11956: ARGINYL-TRNA SYNTHETASE Pfam PF00750: tRNA-synt_1d Pfam PF05746: DALR_1 Pfam PF03485: Arg_tRNA_synt_N |
| Eft2p | Gene3D G3DSA:2.40.30.10: no description |
Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.90.1430.10: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.230.10: no description Gene3D G3DSA:3.30.70.240: no description Pfam PF00009: GTP_EFTU Pfam PF03764: EFG_IV Pfam PF00679: EFG_C Pfam PF03144: GTP_EFTU_D2 SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF54980: EF-G C-terminal domain-like TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain PANTHER PTHR23115:SF4: EUKARYOTIC TRANSLATION ELONGATION FACTOR 2 PANTHER PTHR23115: TRANSLATION FACTOR SMART SM00889: Elongation factor G, domain IV SMART SM00838: Elongation factor G C-terminus PRINTS PR00315: ELONGATNFCT |
| Jip4p | Gene3D G3DSA:3.40.50.620: no description |
none |
| Gcd11p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF50465: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain PRINTS PR00315: ELONGATNFCT PANTHER PTHR23115:SF9: EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT (EIF-2- GAMMA) PANTHER PTHR23115: TRANSLATION FACTOR Gene3D G3DSA:3.40.50.300: no description Pfam PF00009: GTP_EFTU Pfam PF09173: eIF2_C Pfam PF03144: GTP_EFTU_D2 |
| Met10p | Gene3D G3DSA:2.40.30.10: no description |
Gene3D G3DSA:3.40.50.920: no description Gene3D G3DSA:3.40.920.10: no description Gene3D G3DSA:1.20.990.10: no description Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF63380: Riboflavin synthase domain-like SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF53323: Pyruvate-ferredoxin oxidoreductase, PFOR, domain III SUPERFAMILY SSF52922: TK C-terminal domain-like PRINTS PR00371: FPNCR Pfam PF00667: FAD_binding_1 Pfam PF00175: NAD_binding_1 PANTHER PTHR19384:SF16: SULFITE REDUCTASE PANTHER PTHR19384: FLAVODOXIN-RELATED |
| Ncs6p | Gene3D G3DSA:3.40.50.620: no description SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like |
PANTHER PTHR11807:SF3: CANCER-ASSOCIATED GENE PROTEIN PANTHER PTHR11807: ATPASES OF THE PP SUPERFAMILY-RELATED Pfam PF01171: ATP_bind_3 PIR superfamily PIRSF004976: Predicted PP-loop ATPase, YdaO type |
| Gus1p | Gene3D G3DSA:3.40.50.620: no description |
PRINTS PR00987: TRNASYNTHGLU Pfam PF00749: tRNA-synt_1c Pfam PF03950: tRNA-synt_1c_C SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF50715: Ribosomal protein L25-like SUPERFAMILY SSF47616: Glutathione S-transferase (GST), C-terminal domain Gene3D G3DSA:1.20.1050.10: no description Gene3D G3DSA:3.90.800.10: no description Gene3D G3DSA:1.10.1160.10: no description Gene3D G3DSA:2.40.240.10: no description PANTHER PTHR10119:SF16: GLUTAMYL-TRNA SYNTHETASE PANTHER PTHR10119: GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE TIGRFAMs TIGR00463: gltX_arch: glutamate--tRNA ligase |
| Ect1p | Gene3D G3DSA:3.40.50.620: no description |
Pfam PF01467: CTP_transf_2 SUPERFAMILY SSF52374: Nucleotidylyl transferase PANTHER PTHR10739:SF14: ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE PANTHER PTHR10739: CYTIDYLYLTRANSFERASE TIGRFAMs TIGR00125: cyt_tran_rel: cytidyltransferase-like domain |
| Nma2p | Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00482: TIGR00482: nicotinate (nicotinamide) nucleotide ad Pfam PF01467: CTP_transf_2 PANTHER PTHR12039:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12039: NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE SUPERFAMILY SSF52374: Nucleotidylyl transferase |
| Vas1p | Gene3D G3DSA:3.40.50.620: no description |
PANTHER PTHR11946:SF5: VALYL-TRNA SYNTHETASE PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES PRINTS PR00986: TRNASYNTHVAL Gene3D G3DSA:3.90.740.10: no description Gene3D G3DSA:1.10.730.10: no description TIGRFAMs TIGR00422: valS: valine--tRNA ligase Pfam PF00133: tRNA-synt_1 Pfam PF08264: Anticodon_1 SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF50677: ValRS/IleRS/LeuRS editing domain SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases SUPERFAMILY SSF46589: tRNA-binding arm |
| Asn2p | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
Pfam PF00733: Asn_synthase Pfam PF13537: GATase_7 PANTHER PTHR11772: ASPARAGINE SYNTHETASE SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases) Gene3D G3DSA:3.60.20.10: no description TIGRFAMs TIGR01536: asn_synth_AEB: asparagine synthase (glutamine-hydr |
| Msm1p | Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00398: metG: methionine--tRNA ligase Pfam PF09334: tRNA-synt_1g SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases PRINTS PR01041: TRNASYNTHMET Gene3D G3DSA:1.10.730.10: no description PANTHER PTHR11946:SF1: METHIONYL-TRNA SYNTHETASE PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES |
| Tys1p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF52374: Nucleotidylyl transferase PRINTS PR01040: TRNASYNTHTYR Gene3D G3DSA:1.10.240.10: no description TIGRFAMs TIGR00234: tyrS: tyrosine--tRNA ligase Pfam PF00579: tRNA-synt_1b PANTHER PTHR11946:SF8: TYROSYL-TRNA SYNTHETASE PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES PIR superfamily PIRSF006588: Tyrosine tRNA ligase, archaeal/eukaryotic types |
| Pct1p | Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00125: cyt_tran_rel: cytidyltransferase-like domain SUPERFAMILY SSF52374: Nucleotidylyl transferase PANTHER PTHR10739:SF13: CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE PANTHER PTHR10739: CYTIDYLYLTRANSFERASE Pfam PF01467: CTP_transf_2 |
| Cir1p | Gene3D G3DSA:3.40.50.620: no description SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like |
PIR superfamily PIRSF000090: Electron transfer flavoprotein, beta subunit Pfam PF01012: ETF SMART SM00893: Electron transfer flavoprotein domain PANTHER PTHR21294:SF0: SUBFAMILY NOT NAMED PANTHER PTHR21294: ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT |
| Mrpl9p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF50447: Translation proteins PANTHER PTHR11229: 50S RIBOSOMAL PROTEIN L3 Gene3D G3DSA:4.10.960.10: no description Pfam PF00297: Ribosomal_L3 TIGRFAMs TIGR03625: L3_bact: 50S ribosomal protein L3 |
| Yhb1p | Gene3D G3DSA:2.40.30.10: no description |
Gene3D G3DSA:1.10.490.10: no description Gene3D G3DSA:3.40.50.80: no description Pfam PF00970: FAD_binding_6 Pfam PF00042: Globin Pfam PF00175: NAD_binding_1 SUPERFAMILY SSF46458: Globin-like SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR22924: LEGHEMOGLOBIN-RELATED |
| Mes1p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases SUPERFAMILY SSF57770: Methionyl-tRNA synthetase (MetRS), Zn-domain Pfam PF09334: tRNA-synt_1g Pfam PF09635: MetRS-N Gene3D G3DSA:2.20.28.20: no description Gene3D G3DSA:1.10.730.10: no description PANTHER PTHR11946:SF17: LEUCYL-TRNA SYNTHETASE SUBUNIT BETA PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES TIGRFAMs TIGR00398: metG: methionine--tRNA ligase PRINTS PR01041: TRNASYNTHMET |
| Cab4p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF52374: Nucleotidylyl transferase Pfam PF01467: CTP_transf_2 PANTHER PTHR24702:SF0: SUBFAMILY NOT NAMED PANTHER PTHR24702: FAMILY NOT NAMED |
| Ncp1p | Gene3D G3DSA:2.40.30.10: no description |
PANTHER PTHR19384: FLAVODOXIN-RELATED SUPERFAMILY SSF63380: Riboflavin synthase domain-like SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF52218: Flavoproteins Gene3D G3DSA:3.40.50.360: no description Gene3D G3DSA:1.20.990.10: no description Gene3D G3DSA:3.40.50.80: no description Pfam PF00667: FAD_binding_1 Pfam PF00258: Flavodoxin_1 Pfam PF00175: NAD_binding_1 PRINTS PR00371: FPNCR PRINTS PR00369: FLAVODOXIN |
| Qns1p | Gene3D G3DSA:3.40.50.620: no description SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like |
TIGRFAMs TIGR00552: nadE: NAD+ synthetase PIR superfamily PIRSF006630: Glutamine-dependent NAD(+) synthetase with GAT domain Pfam PF00795: CN_hydrolase Pfam PF02540: NAD_synthase PANTHER PTHR23090:SF1: GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE PANTHER PTHR23090: NH(3)/GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE Gene3D G3DSA:3.60.110.10: no description SUPERFAMILY SSF56317: Carbon-nitrogen hydrolase |
| Msr1p | Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00456: argS: arginine--tRNA ligase PRINTS PR01038: TRNASYNTHARG Pfam PF00750: tRNA-synt_1d Pfam PF05746: DALR_1 Pfam PF03485: Arg_tRNA_synt_N Gene3D G3DSA:3.30.1360.70: no description Gene3D G3DSA:1.10.730.10: no description PANTHER PTHR11956: ARGINYL-TRNA SYNTHETASE SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases SUPERFAMILY SSF55190: Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain SMART SM01016: Arginyl tRNA synthetase N terminal do SMART SM00836: DALR anticodon binding domain |
| Cbr1p | Gene3D G3DSA:2.40.30.10: no description |
PANTHER PTHR19370:SF6: GB DEF: PUTATIVE NADH-CYTOCHROME B5 REDUCTASE (EC 1.6.2.2) (P35) PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE Gene3D G3DSA:3.40.50.80: no description PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR Pfam PF00175: NAD_binding_1 Pfam PF00970: FAD_binding_6 SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Pan6p | Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00018: panC: pantoate--beta-alanine ligase SUPERFAMILY SSF52374: Nucleotidylyl transferase Gene3D G3DSA:3.30.1300.10: no description Pfam PF02569: Pantoate_ligase PANTHER PTHR21299:SF1: PANTOATE-BETA-ALANINE LIGASE PANTHER PTHR21299: CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE |
| Mef2p | Gene3D G3DSA:2.40.30.10: no description |
SMART SM00838: Elongation factor G C-terminus PANTHER PTHR23115:SF13: TRANSLATION ELONGATION FACTOR G PANTHER PTHR23115: TRANSLATION FACTOR TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF54980: EF-G C-terminal domain-like Pfam PF00009: GTP_EFTU Pfam PF00679: EFG_C Pfam PF03144: GTP_EFTU_D2 Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.70.240: no description PRINTS PR00315: ELONGATNFCT |
| Met3p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF88697: PUA domain-like SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases TIGRFAMs TIGR00339: sopT: sulfate adenylyltransferase PANTHER PTHR11055:SF2: SULFATE ADENYLYLTRANSFERASE PANTHER PTHR11055: ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE Gene3D G3DSA:3.10.400.10: no description Gene3D G3DSA:3.40.50.300: no description Pfam PF01747: ATP-sulfurylase Pfam PF14306: PUA_2 |
| Mcr1p | Gene3D G3DSA:2.40.30.10: no description |
Gene3D G3DSA:3.40.50.80: no description Pfam PF00175: NAD_binding_1 Pfam PF00970: FAD_binding_6 SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR19370:SF8: SUBFAMILY NOT NAMED PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR |
| Snu114p | Gene3D G3DSA:2.40.30.10: no description |
PRINTS PR00315: ELONGATNFCT Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.90.1430.10: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.230.10: no description Gene3D G3DSA:3.30.70.240: no description PANTHER PTHR23115:SF2: TRANSLATION ELONGATION FACTOR 2-RELATED PANTHER PTHR23115: TRANSLATION FACTOR SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like SUPERFAMILY SSF54980: EF-G C-terminal domain-like SUPERFAMILY SSF50447: Translation proteins SMART SM00889: Elongation factor G, domain IV SMART SM00838: Elongation factor G C-terminus Pfam PF00009: GTP_EFTU Pfam PF03144: GTP_EFTU_D2 Pfam PF03764: EFG_IV Pfam PF00679: EFG_C |
| Fre2p | Gene3D G3DSA:2.40.30.10: no description |
Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR32361:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32361: FAMILY NOT NAMED |
| Hbs1p | Gene3D G3DSA:2.40.30.10: no description |
PRINTS PR00315: ELONGATNFCT PANTHER PTHR23115:SF38: EUKARYOTIC RELEASE FACTOR 3-RELATED (ERFS) (HBS1-LIKE) PANTHER PTHR23115: TRANSLATION FACTOR Pfam PF00009: GTP_EFTU Pfam PF03144: GTP_EFTU_D2 Gene3D G3DSA:3.40.50.300: no description SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50465: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain SUPERFAMILY SSF50447: Translation proteins |
| Mef1p | Gene3D G3DSA:2.40.30.10: no description |
Pfam PF00009: GTP_EFTU Pfam PF03764: EFG_IV Pfam PF00679: EFG_C Pfam PF03144: GTP_EFTU_D2 SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF54980: EF-G C-terminal domain-like PANTHER PTHR23115:SF66: SUBFAMILY NOT NAMED PANTHER PTHR23115: TRANSLATION FACTOR Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.230.10: no description Gene3D G3DSA:3.30.70.240: no description SMART SM00889: Elongation factor G, domain IV SMART SM00838: Elongation factor G C-terminus PRINTS PR00315: ELONGATNFCT TIGRFAMs TIGR00484: EF-G: translation elongation factor G TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain |
| Dph6p | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF55298: YjgF-like Gene3D G3DSA:3.90.1490.10: no description Gene3D G3DSA:3.30.1330.40: no description Pfam PF01902: ATP_bind_4 Pfam PF01042: Ribonuc_L-PSP PANTHER PTHR12196: DOMAIN OF UNKNOWN FUNCTION 71 (DUF71)-CONTAINING PROTEIN TIGRFAMs TIGR00290: MJ0570_dom: MJ0570-related uncharacterized domain |
| Guf1p | Gene3D G3DSA:2.40.30.10: no description |
PRINTS PR00315: ELONGATNFCT SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF54980: EF-G C-terminal domain-like TIGRFAMs TIGR01393: lepA: GTP-binding protein LepA TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain PANTHER PTHR23115:SF40: GTP-BINDING PROTEIN LEPA PANTHER PTHR23115: TRANSLATION FACTOR Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.70.240: no description Pfam PF00009: GTP_EFTU Pfam PF06421: LepA_C Pfam PF00679: EFG_C Pfam PF03144: GTP_EFTU_D2 |
| Nma1p | Gene3D G3DSA:3.40.50.620: no description |
Pfam PF01467: CTP_transf_2 TIGRFAMs TIGR00482: TIGR00482: nicotinate (nicotinamide) nucleotide ad PANTHER PTHR12039:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12039: NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE SUPERFAMILY SSF52374: Nucleotidylyl transferase |
| Nam2p | Gene3D G3DSA:3.40.50.620: no description |
Pfam PF00133: tRNA-synt_1 Pfam PF13603: tRNA-synt_1_2 TIGRFAMs TIGR00396: leuS_bact: leucine--tRNA ligase Gene3D G3DSA:3.90.740.10: no description Gene3D G3DSA:1.10.730.10: no description PRINTS PR00985: TRNASYNTHLEU PANTHER PTHR11946:SF7: LEUCYL-TRNA SYNTHETASE PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF50677: ValRS/IleRS/LeuRS editing domain SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| Aim33p | Gene3D G3DSA:2.40.30.10: no description |
Pfam PF00970: FAD_binding_6 Pfam PF00175: NAD_binding_1 Gene3D G3DSA:3.40.50.80: no description PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR PANTHER PTHR19370:SF12: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Yml096wp | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
PANTHER PTHR11772: ASPARAGINE SYNTHETASE SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases) Gene3D G3DSA:3.60.20.10: no description Pfam PF00733: Asn_synthase Pfam PF13537: GATase_7 |
| Pga3p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR Pfam PF00970: FAD_binding_6 Pfam PF00175: NAD_binding_1 Gene3D G3DSA:3.40.50.80: no description PANTHER PTHR19370:SF12: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE |
| Gua1p | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00884: guaA_Cterm: GMP synthase (glutamine-hydrolyzing), TIGRFAMs TIGR00888: guaA_Nterm: GMP synthase (glutamine-hydrolyzing), SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description Gene3D G3DSA:3.30.300.10: no description PRINTS PR00096: GATASE PRINTS PR00097: ANTSNTHASEII Pfam PF00117: GATase Pfam PF00958: GMP_synt_C Pfam PF02540: NAD_synthase PANTHER PTHR11922:SF2: GMP SYNTHASE PANTHER PTHR11922: GMP SYNTHASE-RELATED |
| Ria1p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like SUPERFAMILY SSF54980: EF-G C-terminal domain-like SUPERFAMILY SSF50447: Translation proteins PANTHER PTHR23115:SF3: TRANSLATION ELONGATION FACTOR PANTHER PTHR23115: TRANSLATION FACTOR PRINTS PR00315: ELONGATNFCT Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.90.1430.10: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.230.10: no description Gene3D G3DSA:3.30.70.240: no description Pfam PF00009: GTP_EFTU Pfam PF00679: EFG_C Pfam PF03144: GTP_EFTU_D2 SMART SM00838: Elongation factor G C-terminus TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain |
| Ynl247wp | Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR00435: cysS: cysteine--tRNA ligase PRINTS PR00983: TRNASYNTHCYS PANTHER PTHR10890:SF3: CYSTEINYL-TRNA SYNTHETASE PANTHER PTHR10890: CYSTEINYL-TRNA SYNTHETASE Pfam PF01406: tRNA-synt_1e SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| Ifm1p | Gene3D G3DSA:2.40.30.10: no description |
Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.40.50.10050: no description TIGRFAMs TIGR00487: IF-2: translation initiation factor IF-2 TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain Pfam PF00009: GTP_EFTU Pfam PF11987: IF-2 Pfam PF04760: IF2_N PANTHER PTHR23115:SF41: TRANSLATION INITIATION FACTOR IF-2 PANTHER PTHR23115: TRANSLATION FACTOR SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF52156: Initiation factor IF2/eIF5b, domain 3 SUPERFAMILY SSF50447: Translation proteins |
| Mse1p | Gene3D G3DSA:3.40.50.620: no description |
PANTHER PTHR10119:SF1: GLUTAMYL-TRNA SYNTHETASE PANTHER PTHR10119: GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE TIGRFAMs TIGR00464: gltX_bact: glutamate--tRNA ligase Gene3D G3DSA:3.90.800.10: no description Gene3D G3DSA:1.10.1160.10: no description Gene3D G3DSA:1.10.10.350: no description Pfam PF00749: tRNA-synt_1c PRINTS PR00987: TRNASYNTHGLU SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF48163: An anticodon-binding domain of class I aminoacyl-tRNA synthetases |
| Arg1p | Gene3D G3DSA:3.40.50.620: no description SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like |
Gene3D G3DSA:3.90.1260.10: no description Gene3D G3DSA:1.20.5.470: no description TIGRFAMs TIGR00032: argG: argininosuccinate synthase PANTHER PTHR11587: ARGININOSUCCINATE SYNTHASE Pfam PF00764: Arginosuc_synth SUPERFAMILY SSF69864: Argininosuccinate synthetase, C-terminal domain |
| Wrs1p | Gene3D G3DSA:3.40.50.620: no description |
PRINTS PR01039: TRNASYNTHTRP TIGRFAMs TIGR00233: trpS: tryptophan--tRNA ligase PANTHER PTHR10055:SF1: TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC PANTHER PTHR10055: TRYPTOPHANYL-TRNA SYNTHETASE SUPERFAMILY SSF52374: Nucleotidylyl transferase Pfam PF00579: tRNA-synt_1b Gene3D G3DSA:1.10.240.10: no description |
| Fre7p | Gene3D G3DSA:2.40.30.10: no description |
Gene3D G3DSA:3.40.50.80: no description PANTHER PTHR11972:SF14: SUBFAMILY NOT NAMED PANTHER PTHR11972: NADPH OXIDASE Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Yor019wp | Gene3D G3DSA:3.40.50.620: no description SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like |
none |
| Cyc2p | Gene3D G3DSA:2.40.30.10: no description |
Pfam PF00970: FAD_binding_6 Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Rpl3p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF50447: Translation proteins PANTHER PTHR11363: 60S RIBOSOMAL PROTEIN L3-RELATED Pfam PF00297: Ribosomal_L3 Gene3D G3DSA:3.30.1430.10: no description |
| Eft1p | Gene3D G3DSA:2.40.30.10: no description |
SMART SM00889: Elongation factor G, domain IV SMART SM00838: Elongation factor G C-terminus TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:3.90.1430.10: no description Gene3D G3DSA:3.30.70.870: no description Gene3D G3DSA:3.30.230.10: no description Gene3D G3DSA:3.30.70.240: no description PRINTS PR00315: ELONGATNFCT PANTHER PTHR23115:SF4: EUKARYOTIC TRANSLATION ELONGATION FACTOR 2 PANTHER PTHR23115: TRANSLATION FACTOR SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF54211: Ribosomal protein S5 domain 2-like SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF54980: EF-G C-terminal domain-like Pfam PF00009: GTP_EFTU Pfam PF03764: EFG_IV Pfam PF00679: EFG_C Pfam PF03144: GTP_EFTU_D2 |
| Gln4p | Gene3D G3DSA:3.40.50.620: no description |
Pfam PF00749: tRNA-synt_1c Pfam PF04558: tRNA_synt_1c_R1 Pfam PF03950: tRNA-synt_1c_C Pfam PF04557: tRNA_synt_1c_R2 TIGRFAMs TIGR00440: glnS: glutamine--tRNA ligase PRINTS PR00987: TRNASYNTHGLU SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF50715: Ribosomal protein L25-like Gene3D G3DSA:3.90.800.10: no description Gene3D G3DSA:1.10.1160.10: no description Gene3D G3DSA:2.40.240.10: no description PANTHER PTHR10119:SF15: GLUTAMINYL-TRNA SYNTHETASE PANTHER PTHR10119: GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE |
| Tuf1p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50447: Translation proteins SUPERFAMILY SSF50465: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain PANTHER PTHR23115:SF31: ELONGATION FACTOR TU (EF-TU) PANTHER PTHR23115: TRANSLATION FACTOR Gene3D G3DSA:3.40.50.300: no description TIGRFAMs TIGR00485: EF-Tu: translation elongation factor Tu TIGRFAMs TIGR00231: small_GTP: small GTP-binding protein domain PRINTS PR00315: ELONGATNFCT Pfam PF00009: GTP_EFTU Pfam PF03143: GTP_EFTU_D3 Pfam PF03144: GTP_EFTU_D2 |
| Fre3p | Gene3D G3DSA:2.40.30.10: no description |
SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct Gene3D G3DSA:3.40.50.80: no description PANTHER PTHR32361:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32361: FAMILY NOT NAMED |
| Phr1p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF48173: Cryptochrome/photolyase FAD-binding domain SUPERFAMILY SSF52425: Cryptochrome/photolyase, N-terminal domain PANTHER PTHR11455: CRYPTOCHROME Gene3D G3DSA:1.25.40.80: no description Gene3D G3DSA:1.10.579.10: no description PRINTS PR00147: DNAPHOTLYASE Pfam PF03441: FAD_binding_7 Pfam PF00875: DNA_photolyase |
| Ism1p | Gene3D G3DSA:3.40.50.620: no description |
Pfam PF00133: tRNA-synt_1 Pfam PF08264: Anticodon_1 PANTHER PTHR11946:SF9: ISOLEUCYL TRNA SYNTHETASE PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES TIGRFAMs TIGR00392: ileS: isoleucine--tRNA ligase Gene3D G3DSA:3.90.740.10: no description Gene3D G3DSA:1.10.730.10: no description SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases SUPERFAMILY SSF50677: ValRS/IleRS/LeuRS editing domain PRINTS PR00984: TRNASYNTHILE |
| Msy1p | Gene3D G3DSA:3.40.50.620: no description |
Gene3D G3DSA:1.10.240.10: no description Gene3D G3DSA:3.10.290.10: no description TIGRFAMs TIGR00234: tyrS: tyrosine--tRNA ligase Pfam PF00579: tRNA-synt_1b PRINTS PR01040: TRNASYNTHTYR SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF55174: Alpha-L RNA-binding motif PANTHER PTHR11766:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11766: TYROSYL-TRNA SYNTHETASE |
| Cdc60p | Gene3D G3DSA:3.40.50.620: no description |
SUPERFAMILY SSF52374: Nucleotidylyl transferase SUPERFAMILY SSF50677: ValRS/IleRS/LeuRS editing domain SUPERFAMILY SSF47323: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Pfam PF00133: tRNA-synt_1 Pfam PF08264: Anticodon_1 Gene3D G3DSA:3.90.740.10: no description Gene3D G3DSA:1.10.730.10: no description PANTHER PTHR11946:SF10: LEUCYL-TRNA SYNTHETASE PANTHER PTHR11946: ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES TIGRFAMs TIGR00395: leuS_arch: leucine--tRNA ligase |
| Aim45p | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
Pfam PF00766: ETF_alpha Pfam PF01012: ETF PANTHER PTHR10909:SF91: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR10909: ELECTRON TRANSPORT OXIDOREDUCTASE PIR superfamily PIRSF000089: Electron transfer flavoprotein, alpha subunit SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain SMART SM00893: Electron transfer flavoprotein domain Gene3D G3DSA:3.40.50.1220: no description |
| Tah18p | Gene3D G3DSA:2.40.30.10: no description |
PRINTS PR00371: FPNCR PRINTS PR00369: FLAVODOXIN SUPERFAMILY SSF63380: Riboflavin synthase domain-like SUPERFAMILY SSF52218: Flavoproteins SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Gene3D G3DSA:3.40.50.360: no description Gene3D G3DSA:1.20.990.10: no description Gene3D G3DSA:3.40.50.80: no description Pfam PF00667: FAD_binding_1 Pfam PF00258: Flavodoxin_1 Pfam PF00175: NAD_binding_1 PANTHER PTHR19384:SF9: NADPH FAD OXIDOREDUCTASE PANTHER PTHR19384: FLAVODOXIN-RELATED |
| Tef1p | Gene3D G3DSA:2.40.30.10: no description |
PANTHER PTHR23115:SF37: ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) PANTHER PTHR23115: TRANSLATION FACTOR SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50465: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain SUPERFAMILY SSF50447: Translation proteins TIGRFAMs TIGR00483: EF-1_alpha: translation elongation factor EF-1, su Pfam PF00009: GTP_EFTU Pfam PF03143: GTP_EFTU_D3 Pfam PF03144: GTP_EFTU_D2 Gene3D G3DSA:3.40.50.300: no description PRINTS PR00315: ELONGATNFCT |
| Asn1p | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR01536: asn_synth_AEB: asparagine synthase (glutamine-hydr SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases) Pfam PF00733: Asn_synthase Pfam PF13537: GATase_7 Gene3D G3DSA:3.60.20.10: no description PANTHER PTHR11772: ASPARAGINE SYNTHETASE |
| Met16p | SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description |
TIGRFAMs TIGR02057: PAPS_reductase: phosphoadenosine phosphosulfate re TIGRFAMs TIGR00434: cysH: phosophoadenylyl-sulfate reductase PANTHER PTHR23293:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23293: FAD SYNTHETASE-RELATED (FMN ADENYLYLTRANSFERASE) Pfam PF01507: PAPS_reduct |
This table lists domains/motifs that are unique to Slm3p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Slm3p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Slm3p | ||
|---|---|---|
| Database source | Accession number | Description |
| Gene3D | G3DSA:2.30.30.280 | no description |
| PANTHER | PTHR11933 | TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE |
| Pfam | PF03054 | tRNA_Me_trans |
| TIGRFAMs | TIGR00420 | trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-m |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Slm3p .
