UBP6/YFR010W Domains/Motifs and Signal Peptides 
To directly search external databases for Ubp6p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Ubp6p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ubp6p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Ubp6p | ||
|---|---|---|
| Protein | Motifs in common with Ubp6p | Other motifs in this protein (but not in Ubp6p ) |
| Shp1p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
SMART SM00553: Domain present in Saccharomyces cerevisiae S SMART SM00166: Domain present in ubiquitin-regulatory prote Pfam PF08059: SEP Pfam PF00789: UBX PANTHER PTHR23333:SF5: UBX DOMAIN CONTAINING PROTEIN PANTHER PTHR23333: UBX DOMAIN CONTAINING PROTEIN SUPERFAMILY SSF102848: NSFL1 (p97 ATPase) cofactor p47, SEP domain SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
| Ubp13p | SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED |
Gene3D G3DSA:2.20.210.10: no description PANTHER PTHR24006:SF123: MEPRIN AND TRAF HOMOLOGY (MATH) DOMAIN-CONTAINING PROTEIN |
| Atg8p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
PANTHER PTHR10969:SF17: AUTOPHAGY-RELATED PROTEIN 8 PANTHER PTHR10969: MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED Pfam PF02991: Atg8 |
| Ubp14p | SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z SMART SM00165: Ubiquitin associated domain Gene3D G3DSA:3.30.40.10: no description Gene3D G3DSA:1.10.8.10: no description PIR superfamily PIRSF016308: Ubiquitin-specific protease (ubiquitin carboxyl-terminal hydrolase) SUPERFAMILY SSF46934: UBA-like PANTHER PTHR24006:SF175: HYPOTHETICAL PROTEIN Pfam PF02148: zf-UBP Pfam PF00627: UBA |
| Npl4p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
Pfam PF05021: NPL4 Pfam PF05020: zf-NPL4 PIR superfamily PIRSF010052: Polyubiquitin-tagged protein recognition complex, Npl4 component PANTHER PTHR12710: NUCLEAR PROTEIN LOCALIZATION 4 |
| Atg12p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
Pfam PF04110: APG12 PANTHER PTHR13385: AUTOPHAGY PROTEIN 12 |
| Ubx7p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
PANTHER PTHR13020:SF3: SUBFAMILY NOT NAMED PANTHER PTHR13020: UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING Pfam PF00789: UBX SMART SM00166: Domain present in ubiquitin-regulatory prote |
| Ste50p | SUPERFAMILY SSF54236: Ubiquitin-like |
Gene3D G3DSA:1.10.150.50: no description Pfam PF09235: Ste50p-SAM Pfam PF00788: RA SUPERFAMILY SSF47769: SAM/Pointed domain SMART SM00314: Ras association (RalGDS/AF-6) domain |
| Ubx3p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
SMART SM00594: no description SMART SM00166: Domain present in ubiquitin-regulatory prote Pfam PF00789: UBX PANTHER PTHR23322:SF14: UBX DOMAIN CONTAINING PROTEIN (FRAGMENT) PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN |
| Cyk3p | SUPERFAMILY SSF54001: Cysteine proteinases |
Gene3D G3DSA:2.30.30.40: no description SMART SM00326: Src homology SMART SM00460: Transglutaminase/protease-like homologues PANTHER PTHR10661:SF52: SH3 DOMAIN-CONTAINING PROTEIN PANTHER PTHR10661: SH3 DOMAIN-CONTAINING PROTEIN SUPERFAMILY SSF50044: SH3-domain |
| Ubp1p | SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH |
PANTHER PTHR24006:SF176: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN |
| Doa4p | Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases |
SMART SM00450: Rhodanese Homology Domain PANTHER PTHR24006:SF42: SUBFAMILY NOT NAMED SUPERFAMILY SSF52821: Rhodanese/Cell cycle control phosphatase Gene3D G3DSA:3.40.250.10: no description |
| Rub1p | Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SUPERFAMILY SSF54236: Ubiquitin-like |
Pfam PF00240: ubiquitin PRINTS PR00348: UBIQUITIN PANTHER PTHR10666:SF16: SUBFAMILY NOT NAMED PANTHER PTHR10666: UBIQUITIN |
| Ubx5p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
Pfam PF13899: Thioredoxin_7 Pfam PF00789: UBX SMART SM00594: no description SMART SM00166: Domain present in ubiquitin-regulatory prote Gene3D G3DSA:1.10.8.10: no description Gene3D G3DSA:3.40.30.10: no description PANTHER PTHR23322:SF6: FAS-ASSOCIATED FACTOR-RELATED PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN SUPERFAMILY SSF46934: UBA-like |
| Esc2p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
PANTHER PTHR10562: SMALL UBIQUITIN-RELATED MODIFIER Pfam PF11976: Rad60-SLD |
| Smt3p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like SMART SM00213: Ubiquitin homologues |
Pfam PF11976: Rad60-SLD PANTHER PTHR10562: SMALL UBIQUITIN-RELATED MODIFIER |
| Rad23p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues |
Pfam PF00627: UBA Pfam PF00240: ubiquitin Pfam PF09280: XPC-binding SUPERFAMILY SSF101238: XPC-binding domain SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description Gene3D G3DSA:1.10.10.540: no description PRINTS PR01839: RAD23PROTEIN PANTHER PTHR10621:SF0: UV EXCISION REPAIR PROTEIN RAD23 PANTHER PTHR10621: UV EXCISION REPAIR PROTEIN RAD23 SMART SM00165: Ubiquitin associated domain SMART SM00727: Heat shock chaperonin-binding motif. TIGRFAMs TIGR00601: rad23: UV excision repair protein Rad23 |
| Pac2p | SUPERFAMILY SSF54236: Ubiquitin-like |
PANTHER PTHR15140:SF6: SUBFAMILY NOT NAMED PANTHER PTHR15140: TUBULIN-SPECIFIC CHAPERONE E Pfam PF01302: CAP_GLY Pfam PF13516: LRR_6 Pfam PF00560: LRR_1 SUPERFAMILY SSF52047: RNI-like SUPERFAMILY SSF74924: Cap-Gly domain SMART SM01052: no description Gene3D G3DSA:2.30.30.190: no description Gene3D G3DSA:3.80.10.10: no description |
| Ubp9p | SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED |
Gene3D G3DSA:2.20.210.10: no description PANTHER PTHR24006:SF123: MEPRIN AND TRAF HOMOLOGY (MATH) DOMAIN-CONTAINING PROTEIN |
| Ubp5p | Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases |
Pfam PF00581: Rhodanese PANTHER PTHR24006:SF42: SUBFAMILY NOT NAMED Gene3D G3DSA:3.40.250.10: no description SUPERFAMILY SSF52821: Rhodanese/Cell cycle control phosphatase SMART SM00450: Rhodanese Homology Domain |
| Ubp3p | PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR24006:SF73: SUBFAMILY NOT NAMED |
| Rad4p | SUPERFAMILY SSF54001: Cysteine proteinases |
SMART SM01030: Rad4 beta-hairpin domain SMART SM01031: Rad4 beta-hairpin domain SMART SM01032: Rad4 beta-hairpin domain PANTHER PTHR12135: DNA REPAIR PROTEIN XP-C / RAD4 Pfam PF03835: Rad4 Pfam PF10405: BHD_3 Pfam PF10403: BHD_1 Pfam PF10404: BHD_2 |
| Otu1p | SUPERFAMILY SSF54001: Cysteine proteinases |
Pfam PF02338: OTU PANTHER PTHR13312:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13312: HIV-INDUCED PROTEIN-7-LIKE PROTEASE |
| Sad1p | SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z PANTHER PTHR24006:SF87: SUBFAMILY NOT NAMED Gene3D G3DSA:3.30.40.10: no description Pfam PF02148: zf-UBP |
| Pan2p | SUPERFAMILY SSF54001: Cysteine proteinases |
SUPERFAMILY SSF50978: WD40 repeat-like SUPERFAMILY SSF53098: Ribonuclease H-like Gene3D G3DSA:2.130.10.10: no description Gene3D G3DSA:3.30.420.10: no description Pfam PF13423: UCH_1 Pfam PF00929: RNase_T SMART SM00479: no description PANTHER PTHR15728:SF0: SUBFAMILY NOT NAMED PANTHER PTHR15728: UBIQUITIN SPECIFIC PROTEASE 52 / POLY(A) RIBONUCLEASE SUBUNIT PAN2 |
| Otu2p | SUPERFAMILY SSF54001: Cysteine proteinases |
Pfam PF02338: OTU PANTHER PTHR12419:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12419: OTU DOMAIN CONTAINING PROTEIN |
| Ulp2p | SUPERFAMILY SSF54001: Cysteine proteinases |
Pfam PF02902: Peptidase_C48 Gene3D G3DSA:3.30.310.130: no description PANTHER PTHR12438:SF2: UBIQUITIN-LIKE PROTEASE PROTEIN 2 PANTHER PTHR12438: UBIQUITIN-LIKE PROTEASE PROTEIN 2 |
| Rpl40ap | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues |
PRINTS PR00348: UBIQUITIN PANTHER PTHR10666: UBIQUITIN Pfam PF00240: ubiquitin Pfam PF01020: Ribosomal_L40e |
| Ubp7p | Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR24006:SF43: SUBFAMILY NOT NAMED SUPERFAMILY SSF52821: Rhodanese/Cell cycle control phosphatase |
| Ubx6p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
Pfam PF00789: UBX SMART SM00166: Domain present in ubiquitin-regulatory prote PANTHER PTHR13020:SF12: UBX DOMAIN-CONTAINING PROTEIN 6 PANTHER PTHR13020: UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING |
| Ubp12p | Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED |
SMART SM00695: Domain in ubiquitin-specific proteases. SUPERFAMILY SSF143791: DUSP-like Gene3D G3DSA:3.30.2230.10: no description PANTHER PTHR24006:SF39: SUBFAMILY NOT NAMED |
| Yuh1p | SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR10589:SF17: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE PANTHER PTHR10589: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Gene3D G3DSA:3.40.532.10: no description PRINTS PR00707: UBCTHYDRLASE Pfam PF01088: Peptidase_C12 |
| Rpl40bp | Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SUPERFAMILY SSF54236: Ubiquitin-like |
PRINTS PR00348: UBIQUITIN Pfam PF00240: ubiquitin Pfam PF01020: Ribosomal_L40e PANTHER PTHR10666: UBIQUITIN |
| Ubp11p | PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH |
PANTHER PTHR24006:SF43: SUBFAMILY NOT NAMED |
| Ubi4p | SMART SM00213: Ubiquitin homologues Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
PRINTS PR00348: UBIQUITIN PANTHER PTHR10666: UBIQUITIN Pfam PF00240: ubiquitin |
| Erg27p | SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR24316:SF33: SUBFAMILY NOT NAMED PANTHER PTHR24316: FAMILY NOT NAMED Gene3D G3DSA:3.40.50.720: no description SUPERFAMILY SSF51735: NAD(P)-binding Rossmann-fold domains |
| Rps31p | Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SUPERFAMILY SSF54236: Ubiquitin-like |
Pfam PF00240: ubiquitin Pfam PF01599: Ribosomal_S27 PRINTS PR00348: UBIQUITIN PANTHER PTHR10666: UBIQUITIN |
| Ste11p | Gene3D G3DSA:3.10.20.90: no description |
SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF47769: SAM/Pointed domain Pfam PF00069: Pkinase Pfam PF07647: SAM_2 PANTHER PTHR24361:SF140: SERINE/THREONINE-PROTEIN KINASE STE11 PANTHER PTHR24361: MITOGEN-ACTIVATED KINASE KINASE KINASE Gene3D G3DSA:1.10.150.50: no description Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:1.10.510.10: no description SMART SM00454: Sterile alpha motif. SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00219: Tyrosine kinase, catalytic domain |
| Ubx2p | Gene3D G3DSA:3.10.20.90: no description |
Pfam PF00789: UBX SUPERFAMILY SSF46934: UBA-like PANTHER PTHR23322:SF14: UBX DOMAIN CONTAINING PROTEIN (FRAGMENT) PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN Gene3D G3DSA:1.10.8.10: no description SMART SM00166: Domain present in ubiquitin-regulatory prote |
| Usa1p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
Pfam PF00240: ubiquitin |
| Ubx4p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like |
Pfam PF11470: TUG Pfam PF00789: UBX SMART SM00166: Domain present in ubiquitin-regulatory prote PANTHER PTHR23153:SF18: UBX DOMAIN PROTEIN PANTHER PTHR23153: UBX-RELATED |
| Rim13p | SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR10183:SF158: SUBFAMILY NOT NAMED PANTHER PTHR10183: CALPAIN Gene3D G3DSA:3.90.70.10: no description SMART SM00230: Calpain-like thiol protease family. |
| Ubp8p | PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z PANTHER PTHR24006:SF72: SUBFAMILY NOT NAMED Gene3D G3DSA:3.30.40.10: no description Pfam PF02148: zf-UBP |
| Dsk2p | Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SUPERFAMILY SSF54236: Ubiquitin-like |
Gene3D G3DSA:1.10.8.10: no description SMART SM00727: Heat shock chaperonin-binding motif. SMART SM00165: Ubiquitin associated domain SUPERFAMILY SSF46934: UBA-like Pfam PF00240: ubiquitin Pfam PF00627: UBA PANTHER PTHR10677: UBIQUILIN |
| Ubp15p | PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR24006:SF89: SUBFAMILY NOT NAMED Gene3D G3DSA:2.20.210.10: no description Pfam PF00917: MATH Pfam PF12436: USP7 SUPERFAMILY SSF49599: TRAF domain-like SMART SM00061: meprin and TRAF homology |
| Alf1p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
PANTHER PTHR18916:SF6: TUBULIN-SPECIFIC CHAPERONE B (TUBULIN FOLDING COFACTOR B) PANTHER PTHR18916: DYNACTIN 1-RELATED MICROTUBULE-BINDING SUPERFAMILY SSF74924: Cap-Gly domain Gene3D G3DSA:2.30.30.190: no description Pfam PF01302: CAP_GLY SMART SM01052: no description |
| Ubp10p | PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH |
PANTHER PTHR24006:SF72: SUBFAMILY NOT NAMED |
| Lap3p | SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR10363:SF2: BLEOMYCIN HYDROLASE PANTHER PTHR10363: BLEOMYCIN HYDROLASE Pfam PF03051: Peptidase_C1_2 Gene3D G3DSA:3.90.70.10: no description PIR superfamily PIRSF005700: Aminopeptidase C (bleomycin hydrolase) |
| Hub1p | SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description |
PANTHER PTHR13042:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13042: FAMILY NOT NAMED Pfam PF00240: ubiquitin |
| Mdy2p | Gene3D G3DSA:3.10.20.90: no description SUPERFAMILY SSF54236: Ubiquitin-like SMART SM00213: Ubiquitin homologues |
PANTHER PTHR10621: UV EXCISION REPAIR PROTEIN RAD23 Pfam PF00240: ubiquitin |
| Ubp2p | SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED |
Pfam PF13446: RPT PANTHER PTHR24006:SF40: SUBFAMILY NOT NAMED |
| Ulp1p | SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR12606:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12606: SENTRIN/SUMO-SPECIFIC PROTEASE Pfam PF02902: Peptidase_C48 Gene3D G3DSA:3.30.310.130: no description |
| Ubp16p | PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases |
PANTHER PTHR24006:SF2: SUBFAMILY NOT NAMED |
| Png1p | SUPERFAMILY SSF54001: Cysteine proteinases |
SMART SM00460: Transglutaminase/protease-like homologues PANTHER PTHR12143:SF2: PEPTIDE N-GLYCANASE (PNGASE) PANTHER PTHR12143: PEPTIDE N-GLYCANASE (PNGASE)-RELATED Pfam PF03835: Rad4 |
This table lists domains/motifs that are unique to Ubp6p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ubp6p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Ubp6p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR24006:SF121 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Ubp6p .
