YFR006W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Yfr006wp domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Yfr006wp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Yfr006wp domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Yfr006wp
Protein	Motifs in common with Yfr006wp	Other motifs in this protein (but not in Yfr006wp )
Map2p	Gene3D G3DSA:3.90.230.10: no description PANTHER PTHR10804: PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) Pfam PF00557: Peptidase_M24 SUPERFAMILY SSF55920: Creatinase/aminopeptidase	PRINTS PR00599: MAPEPTIDASE TIGRFAMs TIGR00501: met_pdase_II: methionine aminopeptidase, type II Gene3D G3DSA:1.10.10.10: no description PANTHER PTHR10804:SF9: METHIONINE AMINOPEPTIDASE 2 SUPERFAMILY SSF46785: "Winged helix" DNA-binding domain
Arx1p	PANTHER PTHR10804: PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) SUPERFAMILY SSF55920: Creatinase/aminopeptidase Gene3D G3DSA:3.90.230.10: no description Pfam PF00557: Peptidase_M24	PANTHER PTHR10804:SF10: GB DEF: HYPOTHETICAL PROTEIN
Icp55p	PANTHER PTHR10804: PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) Pfam PF00557: Peptidase_M24 Pfam PF05195: AMP_N SUPERFAMILY SSF55920: Creatinase/aminopeptidase SUPERFAMILY SSF53092: Creatinase/prolidase N-terminal domain Gene3D G3DSA:3.40.350.10: no description Gene3D G3DSA:3.90.230.10: no description SMART SM01011: Aminopeptidase P, N-terminal domain	PANTHER PTHR10804:SF8: XAA-PRO AMINOPEPTIDASE 3 (X-PRO AMINOPEPTIDASE 3)(AMINOPEPTIDASE P3)
Spt16p	Gene3D G3DSA:3.40.350.10: no description Gene3D G3DSA:3.90.230.10: no description Pfam PF00557: Peptidase_M24 SUPERFAMILY SSF55920: Creatinase/aminopeptidase	PANTHER PTHR13980:SF11: CDC68 RELATED PANTHER PTHR13980: CDC68 RELATED Pfam PF08644: SPT16 Pfam PF08512: Rtt106
Fra1p	Pfam PF00557: Peptidase_M24 SUPERFAMILY SSF55920: Creatinase/aminopeptidase SUPERFAMILY SSF53092: Creatinase/prolidase N-terminal domain PANTHER PTHR10804: PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) Gene3D G3DSA:3.40.350.10: no description Gene3D G3DSA:3.90.230.10: no description	Pfam PF01321: Creatinase_N PANTHER PTHR10804:SF6: X-PROLYL AMINOPEPTIDASE
Map1p	SUPERFAMILY SSF55920: Creatinase/aminopeptidase PANTHER PTHR10804: PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) Gene3D G3DSA:3.90.230.10: no description Pfam PF00557: Peptidase_M24	PANTHER PTHR10804:SF13: METHIONINE AMINOPEPTIDASE 1 TIGRFAMs TIGR00500: met_pdase_I: methionine aminopeptidase, type I PRINTS PR00599: MAPEPTIDASE

Unique domains/motifs

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This table lists domains/motifs that are unique to Yfr006wp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Yfr006wp domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Yfr006wp
Database source	Accession number	Description
PANTHER	PTHR10804:SF17	XAA-PRO DIPEPTIDASE

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	7 - 24

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	1 - 23

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Yfr006wp .