ALR2/YFL050C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Alr2p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Alr2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Alr2p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Alr2p
Protein	Motifs in common with Alr2p	Other motifs in this protein (but not in Alr2p )
Tim8p	PANTHER PTHR21535: MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8	Gene3D G3DSA:1.10.287.810: no description PANTHER PTHR21535:SF2: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8 SUPERFAMILY SSF144122: Tim10-like Pfam PF02953: zf-Tim10_DDP
Mnr2p	Pfam PF01544: CorA SUPERFAMILY SSF143865: CorA soluble domain-like SUPERFAMILY SSF144083: Magnesium transport protein CorA, transmembrane region PANTHER PTHR21535: MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8 Gene3D G3DSA:3.30.460.20: no description Gene3D G3DSA:1.20.58.340: no description	none
Alr1p	Pfam PF01544: CorA SUPERFAMILY SSF143865: CorA soluble domain-like SUPERFAMILY SSF144083: Magnesium transport protein CorA, transmembrane region Gene3D G3DSA:3.30.460.20: no description Gene3D G3DSA:1.20.58.340: no description PANTHER PTHR21535: MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Alr2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Alr2p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Alr2p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	743 - 765
	772 - 794

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Alr2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Alr2p .