PCK1/YKR097W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Pck1p domain/motif information see the external links section.

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Shared domains/motifs
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This table lists proteins that share domains/motifs in common with those found in Pck1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pck1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no shared domains/motifs predicted for Pck1p .

Unique domains/motifs
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This table lists domains/motifs that are unique to Pck1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pck1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Pck1p
Database source Accession number Description
Gene3D G3DSA:3.40.449.10 no description
Gene3D G3DSA:3.90.228.20 no description
PIR superfamily PIRSF006294 Phosphoenolpyruvate carboxykinase [ATP]
PANTHER PTHR30031 PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]
PANTHER PTHR30031:SF0 PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]
Pfam PF01293 PEPCK_ATP
TIGRFAMs TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP)
SUPERFAMILY SSF53795 PEP carboxykinase-like
SUPERFAMILY SSF68923 PEP carboxykinase N-terminal domain

Transmembrane Domains
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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Pck1p .

Signal Peptide(s)
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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Pck1p .

External Links
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The following external links can be used to directly search external databases for domain/motif information for Pck1p .