UTP30/YKR060W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Utp30p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Utp30p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Utp30p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Utp30p
Protein	Motifs in common with Utp30p	Other motifs in this protein (but not in Utp30p )
Nhp2p	PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	PRINTS PR00881: L7ARS6FAMILY PRINTS PR00883: NUCLEARHMG Pfam PF01248: Ribosomal_L7Ae PANTHER PTHR23105:SF12: NUCLEOLAR PROTEIN FAMILY A MEMBER 2 Gene3D G3DSA:3.30.1330.30: no description SUPERFAMILY SSF55315: L30e-like
Mrpl1p	PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER SUPERFAMILY SSF56808: Ribosomal protein L1 Pfam PF00687: Ribosomal_L1	PANTHER PTHR23105:SF5: 50S RIBOSOMAL PROTEIN L1P PIR superfamily PIRSF002155: Ribosomal protein, L1p/L1a/L10e/organellar L1 types Gene3D G3DSA:3.30.190.20: no description Gene3D G3DSA:3.40.50.790: no description TIGRFAMs TIGR01170: rplA_mito: ribosomal protein L1, mitochondrial
Snu13p	PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	Pfam PF01248: Ribosomal_L7Ae SUPERFAMILY SSF55315: L30e-like Gene3D G3DSA:3.30.1330.30: no description PANTHER PTHR23105:SF11: RIBOSOMAL PROTEIN L7AE PRINTS PR00883: NUCLEARHMG PRINTS PR00881: L7ARS6FAMILY
Rpl1bp	SUPERFAMILY SSF56808: Ribosomal protein L1 Pfam PF00687: Ribosomal_L1 PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	Gene3D G3DSA:3.30.190.20: no description Gene3D G3DSA:3.40.50.790: no description PIR superfamily PIRSF002155: Ribosomal protein, L1p/L1a/L10e/organellar L1 types PANTHER PTHR23105:SF4: 60S RIBOSOMAL PROTEIN L10A
Rpl8ap	PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	PANTHER PTHR23105:SF1: 60S RIBOSOMAL PROTEIN L7A SUPERFAMILY SSF55315: L30e-like PRINTS PR00882: RIBOSOMALL7A PRINTS PR00881: L7ARS6FAMILY Pfam PF01248: Ribosomal_L7Ae Gene3D G3DSA:3.30.1330.30: no description
Cic1p	Pfam PF00687: Ribosomal_L1 SUPERFAMILY SSF56808: Ribosomal protein L1 PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	PANTHER PTHR23105:SF23: SUBFAMILY NOT NAMED
Rpl8bp	PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	PRINTS PR00882: RIBOSOMALL7A PRINTS PR00881: L7ARS6FAMILY PANTHER PTHR23105:SF1: 60S RIBOSOMAL PROTEIN L7A Gene3D G3DSA:3.30.1330.30: no description Pfam PF01248: Ribosomal_L7Ae SUPERFAMILY SSF55315: L30e-like
Rpl1ap	Pfam PF00687: Ribosomal_L1 SUPERFAMILY SSF56808: Ribosomal protein L1 PANTHER PTHR23105: RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	PIR superfamily PIRSF002155: Ribosomal protein, L1p/L1a/L10e/organellar L1 types Gene3D G3DSA:3.30.190.20: no description Gene3D G3DSA:3.40.50.790: no description PANTHER PTHR23105:SF4: 60S RIBOSOMAL PROTEIN L10A

Unique domains/motifs

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This table lists domains/motifs that are unique to Utp30p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Utp30p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Utp30p
Database source	Accession number	Description
PANTHER	PTHR23105:SF3	PBK1-RELATED

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Utp30p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Utp30p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Utp30p .