MTR2/YKL186C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Mtr2p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Mtr2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mtr2p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Mtr2p
Protein	Motifs in common with Mtr2p	Other motifs in this protein (but not in Mtr2p )
Ntf2p	SUPERFAMILY SSF54427: NTF2-like Gene3D G3DSA:3.10.450.50: no description	PANTHER PTHR12612: NUCLEAR TRANSPORT FACTOR 2 Pfam PF02136: NTF2
Tim44p	SUPERFAMILY SSF54427: NTF2-like	PANTHER PTHR10721: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 PIR superfamily PIRSF037871: Import inner membrane translocase, TIM44 subunit, mitochondrial type Pfam PF04280: Tim44 SMART SM00978: no description
Bre5p	SUPERFAMILY SSF54427: NTF2-like Gene3D G3DSA:3.10.450.50: no description	Pfam PF02136: NTF2 PANTHER PTHR10693:SF11: RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN PANTHER PTHR10693: RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN
Mex67p	Gene3D G3DSA:3.10.450.50: no description SUPERFAMILY SSF54427: NTF2-like	PANTHER PTHR10662:SF22: MRNA EXPORT FACTOR MEX67 PANTHER PTHR10662: NUCLEAR RNA EXPORT FACTOR SMART SM00804: C-terminal domain of vertebrate Tap protein Gene3D G3DSA:3.80.10.10: no description Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF52058: L domain-like SUPERFAMILY SSF46934: UBA-like Pfam PF03943: TAP_C

Unique domains/motifs

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This table lists domains/motifs that are unique to Mtr2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mtr2p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Mtr2p
Database source	Accession number	Description
Pfam	PF10429	Mtr2

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Mtr2p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Mtr2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Mtr2p .