MCD4/YKL165C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Mcd4p domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Mcd4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mcd4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Mcd4p
Protein	Motifs in common with Mcd4p	Other motifs in this protein (but not in Mcd4p )
Npp1p	Pfam PF01663: Phosphodiest Gene3D G3DSA:3.40.720.10: no description SUPERFAMILY SSF53649: Alkaline phosphatase-like	PANTHER PTHR10151:SF50: ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE PANTHER PTHR10151: ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Pho8p	SUPERFAMILY SSF53649: Alkaline phosphatase-like Gene3D G3DSA:3.40.720.10: no description	Pfam PF00245: Alk_phosphatase PRINTS PR00113: ALKPHPHTASE SMART SM00098: Alkaline phosphatase homologues PANTHER PTHR11596:SF5: REPRESSIBLE ALKALINE PHOSPHATASE III, IV PANTHER PTHR11596: ALKALINE PHOSPHATASE
Npp2p	SUPERFAMILY SSF53649: Alkaline phosphatase-like Pfam PF01663: Phosphodiest Gene3D G3DSA:3.40.720.10: no description	PANTHER PTHR10151:SF50: ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE PANTHER PTHR10151: ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Las21p	Gene3D G3DSA:3.40.720.10: no description Pfam PF01663: Phosphodiest SUPERFAMILY SSF53649: Alkaline phosphatase-like	PANTHER PTHR23072:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23072: PHOSPHATIDYLINOSITOL GLYCAN-RELATED
Gpi13p	Pfam PF01663: Phosphodiest SUPERFAMILY SSF53649: Alkaline phosphatase-like Gene3D G3DSA:3.40.720.10: no description	PANTHER PTHR23071: PHOSPHATIDYLINOSITOL GLYCAN

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Mcd4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mcd4p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Mcd4p
Database source	Accession number	Description
PANTHER	PTHR12250	PHOSPHATIDYLINOSITOL GLYCAN, CLASS N
Pfam	PF04987	PigN

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	7 - 29
	458 - 480
	492 - 510
	515 - 534
	555 - 572
	576 - 594
	599 - 616
	626 - 643
	656 - 675
	690 - 708
	720 - 742
	819 - 841
	848 - 870
	880 - 902

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	1 - 36

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Mcd4p .