MRT4/YKL009W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Mrt4p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Mrt4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mrt4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Mrt4p
Protein	Motifs in common with Mrt4p	Other motifs in this protein (but not in Mrt4p )
Rpp1ap	PANTHER PTHR21141: 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	Pfam PF00428: Ribosomal_60s
Rpp1bp	PANTHER PTHR21141: 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	Pfam PF00428: Ribosomal_60s
Mrpl11p	Pfam PF00466: Ribosomal_L10	ProDom PD968187: Q30KS2_CANFA_Q30KS2;
Rpp2bp	PANTHER PTHR21141: 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	Pfam PF00428: Ribosomal_60s
Rpp0p	Pfam PF00466: Ribosomal_L10 PANTHER PTHR21141: 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	Pfam PF00428: Ribosomal_60s PANTHER PTHR21141:SF3: 60S ACIDIC RIBOSOMAL PROTEIN P0
Rpp2ap	PANTHER PTHR21141: 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	Pfam PF00428: Ribosomal_60s

Unique domains/motifs

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This table lists domains/motifs that are unique to Mrt4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Mrt4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Mrt4p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Mrt4p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Mrt4p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Mrt4p .