YPS6/YIR039C Domains/Motifs and Signal Peptides 
To directly search external databases for Yps6p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Yps6p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Yps6p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Yps6p | ||
|---|---|---|
| Protein | Motifs in common with Yps6p | Other motifs in this protein (but not in Yps6p ) |
| Mkc7p | Pfam PF00026: Asp SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description PRINTS PR00792: PEPSIN PANTHER PTHR13683:SF94: YAPSIN PANTHER PTHR13683: ASPARTYL PROTEASES |
none |
| Yps7p | PANTHER PTHR13683: ASPARTYL PROTEASES SUPERFAMILY SSF50630: Acid proteases PRINTS PR00792: PEPSIN Gene3D G3DSA:2.40.70.10: no description Pfam PF00026: Asp |
PANTHER PTHR13683:SF154: CG5863-PA |
| Ddi1p | SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description |
Pfam PF09668: Asp_protease Pfam PF00627: UBA SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description PANTHER PTHR12917:SF1: DNA-DAMAGE INDUCIBLE PROTEIN DDI1 (V-SNARE-MASTER 1) PANTHER PTHR12917: ASPARTYL PROTEASE DDI-RELATED SMART SM00165: Ubiquitin associated domain |
| Ygl258w-ap | Gene3D G3DSA:2.40.70.10: no description Pfam PF00026: Asp |
none |
| Yps5p | SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description Pfam PF00026: Asp |
none |
| Ygr109w-bp | SUPERFAMILY SSF50630: Acid proteases |
Gene3D G3DSA:3.10.10.10: no description Gene3D G3DSA:3.30.70.270: no description Gene3D G3DSA:3.30.420.10: no description SMART SM00343: zinc finger Pfam PF12384: Peptidase_A2B Pfam PF00078: RVT_1 Pfam PF00665: rve Pfam PF03732: Retrotrans_gag SUPERFAMILY SSF56672: DNA/RNA polymerases SUPERFAMILY SSF53098: Ribonuclease H-like PANTHER PTHR10178:SF14: RETROVIRUS POLYPROTEIN PANTHER PTHR10178: GAG/POL/ENV POLYPROTEIN |
| Bar1p | SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description PANTHER PTHR13683:SF94: YAPSIN PANTHER PTHR13683: ASPARTYL PROTEASES PRINTS PR00792: PEPSIN Pfam PF00026: Asp |
none |
| Yil080wp | SUPERFAMILY SSF50630: Acid proteases |
Gene3D G3DSA:3.10.10.10: no description Gene3D G3DSA:3.30.70.270: no description Gene3D G3DSA:3.30.420.10: no description Pfam PF12384: Peptidase_A2B Pfam PF00078: RVT_1 Pfam PF00665: rve Pfam PF03732: Retrotrans_gag PANTHER PTHR10178:SF14: RETROVIRUS POLYPROTEIN PANTHER PTHR10178: GAG/POL/ENV POLYPROTEIN SMART SM00343: zinc finger SUPERFAMILY SSF56672: DNA/RNA polymerases SUPERFAMILY SSF53098: Ribonuclease H-like |
| Yil082w-ap | SUPERFAMILY SSF50630: Acid proteases |
SUPERFAMILY SSF56672: DNA/RNA polymerases SUPERFAMILY SSF53098: Ribonuclease H-like Pfam PF12384: Peptidase_A2B Pfam PF00078: RVT_1 Pfam PF00665: rve Pfam PF03732: Retrotrans_gag SMART SM00343: zinc finger PANTHER PTHR10178:SF14: RETROVIRUS POLYPROTEIN PANTHER PTHR10178: GAG/POL/ENV POLYPROTEIN Gene3D G3DSA:3.10.10.10: no description Gene3D G3DSA:3.30.70.270: no description Gene3D G3DSA:3.30.420.10: no description |
| Yps1p | SUPERFAMILY SSF50630: Acid proteases PANTHER PTHR13683:SF94: YAPSIN PANTHER PTHR13683: ASPARTYL PROTEASES Pfam PF00026: Asp PRINTS PR00792: PEPSIN Gene3D G3DSA:2.40.70.10: no description |
none |
| Yps3p | PRINTS PR00792: PEPSIN Gene3D G3DSA:2.40.70.10: no description PANTHER PTHR13683:SF94: YAPSIN PANTHER PTHR13683: ASPARTYL PROTEASES Pfam PF00026: Asp SUPERFAMILY SSF50630: Acid proteases |
none |
| Pep4p | PRINTS PR00792: PEPSIN Pfam PF00026: Asp PANTHER PTHR13683: ASPARTYL PROTEASES SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description |
PANTHER PTHR13683:SF75: VACUOLAR PROTEASE A |
This table lists domains/motifs that are unique to Yps6p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Yps6p domain/motif information see the external links section.
Last updated on 2013-05-06
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
| Predicted Signal Peptide(s) (Click on image for expanded interactive view) | Amino Acid Coordinate(s) |
|---|---|
| 1 - 24 |
The following external links can be used to directly search external databases for domain/motif information for Yps6p .
