KGD1/YIL125W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Kgd1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Kgd1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Kgd1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Kgd1p
Protein	Motifs in common with Kgd1p	Other motifs in this protein (but not in Kgd1p )
Tkl2p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description Pfam PF02779: Transket_pyr SMART SM00861: Transketolase, pyrimidine binding domain	PANTHER PTHR11624:SF1: TRANSKETOLASE PANTHER PTHR11624: DEHYDROGENASE RELATED TIGRFAMs TIGR00232: tktlase_bact: transketolase SUPERFAMILY SSF52922: TK C-terminal domain-like Gene3D G3DSA:3.40.50.920: no description Pfam PF00456: Transketolase_N Pfam PF02780: Transketolase_C
Pdb1p	Pfam PF02779: Transket_pyr SMART SM00861: Transketolase, pyrimidine binding domain Gene3D G3DSA:3.40.50.970: no description SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding)	PANTHER PTHR11624:SF11: PYRUVATE DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT PANTHER PTHR11624: DEHYDROGENASE RELATED Pfam PF02780: Transketolase_C Gene3D G3DSA:3.40.50.920: no description SUPERFAMILY SSF52922: TK C-terminal domain-like
Thi3p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description	PIR superfamily PIRSF036565: Pyruvate decarboxylase/indolepyruvate decarboxylase PANTHER PTHR18968:SF4: PYRUVATE DECARBOXYLASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES Pfam PF02776: TPP_enzyme_N Pfam PF00205: TPP_enzyme_M Pfam PF02775: TPP_enzyme_C SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain Gene3D G3DSA:3.40.50.1220: no description
Aro10p	Gene3D G3DSA:3.40.50.970: no description SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding)	Gene3D G3DSA:3.40.50.1220: no description Pfam PF02776: TPP_enzyme_N Pfam PF00205: TPP_enzyme_M Pfam PF02775: TPP_enzyme_C PANTHER PTHR18968:SF4: PYRUVATE DECARBOXYLASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES PIR superfamily PIRSF036565: Pyruvate decarboxylase/indolepyruvate decarboxylase SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain
Yel020cp	Gene3D G3DSA:3.40.50.970: no description SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding)	Gene3D G3DSA:3.40.50.1220: no description PANTHER PTHR18968:SF6: 2-HYDROXYPHYTANOYL-COA LYASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES Pfam PF02776: TPP_enzyme_N Pfam PF00205: TPP_enzyme_M Pfam PF02775: TPP_enzyme_C SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain
Pda1p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description Pfam PF00676: E1_dh	PANTHER PTHR11516:SF4: PYRUVATE DEHYDROGENASE E1 COMPONENT ALPHA SUBUNIT, MITOCHONDRIAL PANTHER PTHR11516: PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) TIGRFAMs TIGR03182: PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-tran
Pdc6p	Gene3D G3DSA:3.40.50.970: no description SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding)	PIR superfamily PIRSF036565: Pyruvate decarboxylase/indolepyruvate decarboxylase Gene3D G3DSA:3.40.50.1220: no description Pfam PF00205: TPP_enzyme_M Pfam PF02776: TPP_enzyme_N Pfam PF02775: TPP_enzyme_C SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain PANTHER PTHR18968:SF4: PYRUVATE DECARBOXYLASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES
Met5p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description	SUPERFAMILY SSF56014: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 SUPERFAMILY SSF52218: Flavoproteins SUPERFAMILY SSF55124: Sulfite reductase, domains 1 and 3 SUPERFAMILY SSF52922: TK C-terminal domain-like PRINTS PR00369: FLAVODOXIN PRINTS PR00397: SIROHAEM PANTHER PTHR32363:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32363: FAMILY NOT NAMED Gene3D G3DSA:3.40.50.920: no description Gene3D G3DSA:3.40.50.360: no description Gene3D G3DSA:3.90.480.10: no description Gene3D G3DSA:3.30.413.10: no description Pfam PF01077: NIR_SIR Pfam PF00258: Flavodoxin_1 Pfam PF03460: NIR_SIR_ferr
Pdc1p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description	PIR superfamily PIRSF036565: Pyruvate decarboxylase/indolepyruvate decarboxylase PANTHER PTHR18968:SF4: PYRUVATE DECARBOXYLASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain Gene3D G3DSA:3.40.50.1220: no description Pfam PF00205: TPP_enzyme_M Pfam PF02776: TPP_enzyme_N Pfam PF02775: TPP_enzyme_C
Pdc5p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description	Pfam PF00205: TPP_enzyme_M Pfam PF02776: TPP_enzyme_N Pfam PF02775: TPP_enzyme_C SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain Gene3D G3DSA:3.40.50.1220: no description PANTHER PTHR18968:SF4: PYRUVATE DECARBOXYLASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES PIR superfamily PIRSF036565: Pyruvate decarboxylase/indolepyruvate decarboxylase
Ilv2p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Gene3D G3DSA:3.40.50.970: no description	SUPERFAMILY SSF52467: DHS-like NAD/FAD-binding domain PANTHER PTHR18968:SF13: ACETOLACTATE SYNTHASE PANTHER PTHR18968: THIAMINE PYROPHOSPHATE ENZYMES Pfam PF02776: TPP_enzyme_N Pfam PF02775: TPP_enzyme_C Pfam PF00205: TPP_enzyme_M Gene3D G3DSA:3.40.50.1220: no description TIGRFAMs TIGR00118: acolac_lg: acetolactate synthase, large subunit, b
Tkl1p	SUPERFAMILY SSF52518: Thiamin diphosphate-binding fold (THDP-binding) Pfam PF02779: Transket_pyr Gene3D G3DSA:3.40.50.970: no description SMART SM00861: Transketolase, pyrimidine binding domain	PANTHER PTHR11624:SF1: TRANSKETOLASE PANTHER PTHR11624: DEHYDROGENASE RELATED SUPERFAMILY SSF52922: TK C-terminal domain-like Pfam PF00456: Transketolase_N Pfam PF02780: Transketolase_C TIGRFAMs TIGR00232: tktlase_bact: transketolase Gene3D G3DSA:3.40.50.920: no description

Unique domains/motifs

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This table lists domains/motifs that are unique to Kgd1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Kgd1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Kgd1p
Database source	Accession number	Description
PIR superfamily	PIRSF000157	2-oxoglutarate dehydrogenase, E1 component
PANTHER	PTHR23152	2-OXOGLUTARATE DEHYDROGENASE
PANTHER	PTHR23152:SF0	SUBFAMILY NOT NAMED
TIGRFAMs	TIGR00239	2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-t

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Kgd1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Kgd1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Kgd1p .