RNR3/YIL066C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rnr3p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Rnr3p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rnr3p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rnr3p
Protein	Motifs in common with Rnr3p	Other motifs in this protein (but not in Rnr3p )
Rnr1p	Gene3D G3DSA:3.20.70.20: no description PANTHER PTHR11573:SF6: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN PANTHER PTHR11573: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN SUPERFAMILY SSF51998: PFL-like glycyl radical enzymes SUPERFAMILY SSF48168: R1 subunit of ribonucleotide reductase, N-terminal domain PRINTS PR01183: RIBORDTASEM1 Pfam PF02867: Ribonuc_red_lgC Pfam PF00317: Ribonuc_red_lgN Pfam PF03477: ATP-cone TIGRFAMs TIGR02506: NrdE_NrdA: ribonucleoside-diphosphate reductase, a	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Rnr3p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rnr3p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rnr3p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rnr3p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rnr3p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rnr3p .