DCD1/YHR144C Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Dcd1p domain/motif information see the external links section.


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Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Dcd1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dcd1p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Dcd1p
Protein Motifs in common with Dcd1p Other motifs in this protein (but not in Dcd1p )
Rri1p Gene3D G3DSA:3.40.140.10: no description
Pfam PF01398: JAB
PANTHER PTHR10410:SF6: COP9 SIGNALOSOME COMPLEX SUBUNIT 5
PANTHER PTHR10410: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
SUPERFAMILY SSF102712: JAB1/MPN domain
SMART SM00232: JAB/MPN domain
Rpn11p Gene3D G3DSA:3.40.140.10: no description
Pfam PF01398: JAB
Pfam PF13012: MitMem_reg
SMART SM00232: JAB/MPN domain
SUPERFAMILY SSF102712: JAB1/MPN domain
PANTHER PTHR10410:SF5: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14
PANTHER PTHR10410: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Tad2p Gene3D G3DSA:3.40.140.10: no description
SUPERFAMILY SSF53927: Cytidine deaminase-like
Pfam PF00383: dCMP_cyt_deam_1
PANTHER PTHR11079:SF9: CYTIDINE/DEOXYCYTIDYLATE DEAMINASE-RELATED
PANTHER PTHR11079: CYTOSINE DEAMINASE
Ade16p SUPERFAMILY SSF53927: Cytidine deaminase-like
PIR superfamily PIRSF000414: Bifunctional purine biosynthesis protein, PurH type
SUPERFAMILY SSF52335: Methylglyoxal synthase-like
SMART SM00851: MGS-like domain
SMART SM00798: AICARFT/IMPCHase bienzyme
Gene3D G3DSA:3.40.50.1380: no description
Gene3D G3DSA:3.40.140.20: no description
Gene3D G3DSA:1.10.287.440: no description
PANTHER PTHR11692: BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN
TIGRFAMs TIGR00355: purH: phosphoribosylaminoimidazolecarboxamide form
Pfam PF01808: AICARFT_IMPCHas
Pfam PF02142: MGS
Cdd1p Gene3D G3DSA:3.40.140.10: no description
SUPERFAMILY SSF53927: Cytidine deaminase-like
Pfam PF00383: dCMP_cyt_deam_1
TIGRFAMs TIGR01354: cyt_deam_tetra: cytidine deaminase
PANTHER PTHR11644:SF2: CYTIDINE DEAMINASE
PANTHER PTHR11644: CYTIDINE DEAMINASE
Tad3p Pfam PF00383: dCMP_cyt_deam_1
SUPERFAMILY SSF53927: Cytidine deaminase-like
Gene3D G3DSA:3.40.140.10: no description
PANTHER PTHR11079:SF2: TRNA-SPECIFIC ADENOSINE DEAMINASE 3
PANTHER PTHR11079: CYTOSINE DEAMINASE
Ade17p SUPERFAMILY SSF53927: Cytidine deaminase-like
SUPERFAMILY SSF52335: Methylglyoxal synthase-like
SMART SM00851: MGS-like domain
SMART SM00798: AICARFT/IMPCHase bienzyme
PANTHER PTHR11692: BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN
Gene3D G3DSA:3.40.50.1380: no description
Gene3D G3DSA:3.40.140.20: no description
Gene3D G3DSA:1.10.287.440: no description
PIR superfamily PIRSF000414: Bifunctional purine biosynthesis protein, PurH type
Pfam PF01808: AICARFT_IMPCHas
Pfam PF02142: MGS
TIGRFAMs TIGR00355: purH: phosphoribosylaminoimidazolecarboxamide form
Rib2p Pfam PF00383: dCMP_cyt_deam_1
Gene3D G3DSA:3.40.140.10: no description
SUPERFAMILY SSF53927: Cytidine deaminase-like
Pfam PF00849: PseudoU_synth_2
SUPERFAMILY SSF55120: Pseudouridine synthase
PANTHER PTHR10436:SF40: RNA PSEUDOURIDYLATE SYNTHASE
PANTHER PTHR10436: RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN
TIGRFAMs TIGR00005: rluA_subfam: pseudouridine synthase, RluA family
Fcy1p Pfam PF00383: dCMP_cyt_deam_1
Gene3D G3DSA:3.40.140.10: no description
SUPERFAMILY SSF53927: Cytidine deaminase-like
PANTHER PTHR11079:SF26: SUBFAMILY NOT NAMED
PANTHER PTHR11079: CYTOSINE DEAMINASE

Unique domains/motifs


This table lists domains/motifs that are unique to Dcd1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dcd1p domain/motif information see the external links section.

Last updated on 2013-12-16

Domain/motifs that are unique to Dcd1p
Database source Accession number Description
PANTHER PTHR11086 DEOXYCYTIDYLATE DEAMINASE-RELATED
PANTHER PTHR11086:SF2 DEOXYCYTIDYLATE DEAMINASE

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Dcd1p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Dcd1p .


The following external links can be used to directly search external databases for domain/motif information for Dcd1p .