DCD1/YHR144C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Dcd1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Dcd1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dcd1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Dcd1p
Protein	Motifs in common with Dcd1p	Other motifs in this protein (but not in Dcd1p )
Rri1p	Gene3D G3DSA:3.40.140.10: no description	Pfam PF01398: JAB SMART SM00232: JAB/MPN domain PANTHER PTHR10410:SF6: COP9 SIGNALOSOME COMPLEX SUBUNIT 5 PANTHER PTHR10410: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED SUPERFAMILY SSF102712: JAB1/MPN domain
Rpn11p	Gene3D G3DSA:3.40.140.10: no description	SUPERFAMILY SSF102712: JAB1/MPN domain Pfam PF01398: JAB Pfam PF13012: MitMem_reg SMART SM00232: JAB/MPN domain PANTHER PTHR10410:SF5: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14 PANTHER PTHR10410: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Tad2p	SUPERFAMILY SSF53927: Cytidine deaminase-like Gene3D G3DSA:3.40.140.10: no description Pfam PF00383: dCMP_cyt_deam_1	PANTHER PTHR11079:SF9: CYTIDINE/DEOXYCYTIDYLATE DEAMINASE-RELATED PANTHER PTHR11079: CYTOSINE DEAMINASE
Ade16p	SUPERFAMILY SSF53927: Cytidine deaminase-like	PIR superfamily PIRSF000414: Bifunctional purine biosynthesis protein, PurH type SMART SM00851: MGS-like domain SMART SM00798: AICARFT/IMPCHase bienzyme Gene3D G3DSA:3.40.50.1380: no description Gene3D G3DSA:3.40.140.20: no description Gene3D G3DSA:1.10.287.440: no description Pfam PF01808: AICARFT_IMPCHas Pfam PF02142: MGS TIGRFAMs TIGR00355: purH: phosphoribosylaminoimidazolecarboxamide form SUPERFAMILY SSF52335: Methylglyoxal synthase-like PANTHER PTHR11692: BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN
Cdd1p	Pfam PF00383: dCMP_cyt_deam_1 SUPERFAMILY SSF53927: Cytidine deaminase-like Gene3D G3DSA:3.40.140.10: no description	TIGRFAMs TIGR01354: cyt_deam_tetra: cytidine deaminase PANTHER PTHR11644:SF2: CYTIDINE DEAMINASE PANTHER PTHR11644: CYTIDINE DEAMINASE
Tad3p	Pfam PF00383: dCMP_cyt_deam_1 SUPERFAMILY SSF53927: Cytidine deaminase-like Gene3D G3DSA:3.40.140.10: no description	PANTHER PTHR11079:SF2: TRNA-SPECIFIC ADENOSINE DEAMINASE 3 PANTHER PTHR11079: CYTOSINE DEAMINASE
Ade17p	SUPERFAMILY SSF53927: Cytidine deaminase-like	SMART SM00851: MGS-like domain SMART SM00798: AICARFT/IMPCHase bienzyme PIR superfamily PIRSF000414: Bifunctional purine biosynthesis protein, PurH type SUPERFAMILY SSF52335: Methylglyoxal synthase-like Gene3D G3DSA:3.40.50.1380: no description Gene3D G3DSA:3.40.140.20: no description Gene3D G3DSA:1.10.287.440: no description PANTHER PTHR11692: BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN Pfam PF01808: AICARFT_IMPCHas Pfam PF02142: MGS TIGRFAMs TIGR00355: purH: phosphoribosylaminoimidazolecarboxamide form
Rib2p	Gene3D G3DSA:3.40.140.10: no description SUPERFAMILY SSF53927: Cytidine deaminase-like Pfam PF00383: dCMP_cyt_deam_1	TIGRFAMs TIGR00005: rluA_subfam: pseudouridine synthase, RluA family SUPERFAMILY SSF55120: Pseudouridine synthase PANTHER PTHR10436:SF40: RNA PSEUDOURIDYLATE SYNTHASE PANTHER PTHR10436: RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN Pfam PF00849: PseudoU_synth_2
Fcy1p	SUPERFAMILY SSF53927: Cytidine deaminase-like Gene3D G3DSA:3.40.140.10: no description Pfam PF00383: dCMP_cyt_deam_1	PANTHER PTHR11079:SF26: SUBFAMILY NOT NAMED PANTHER PTHR11079: CYTOSINE DEAMINASE

Unique domains/motifs

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This table lists domains/motifs that are unique to Dcd1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dcd1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Dcd1p
Database source	Accession number	Description
PANTHER	PTHR11086	DEOXYCYTIDYLATE DEAMINASE-RELATED
PANTHER	PTHR11086:SF2	DEOXYCYTIDYLATE DEAMINASE

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Dcd1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Dcd1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Dcd1p .