CIA2/YHR122W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Cia2p domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Cia2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cia2p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Cia2p
Protein	Motifs in common with Cia2p	Other motifs in this protein (but not in Cia2p )
Nfu1p	SUPERFAMILY SSF117916: Fe-S cluster assembly (FSCA) domain-like	Gene3D G3DSA:3.30.1370.70: no description SMART SM00932: Scaffold protein Nfu/NifU N terminal PIR superfamily PIRSF036773: HIRA-interacting protein 5 PANTHER PTHR11178:SF0: NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL PANTHER PTHR11178: IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED Pfam PF01106: NifU Pfam PF08712: Nfu_N SUPERFAMILY SSF110836: Hypothetical protein SAV1430 ProDom PD002830: NFU1_YEAST_P32860;

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Cia2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cia2p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Cia2p
Database source	Accession number	Description
PANTHER	PTHR12377	UNCHARACTERIZED
PANTHER	PTHR12377:SF0	SUBFAMILY NOT NAMED
Pfam	PF01883	DUF59

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Cia2p .

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Cia2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Cia2p .